Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1210 ATGAACTCATCTTGCTCCGCTGCAGACTCTACCATGGAAGATCCCTCCAACCACCGCCGCTCCAAGAAGCACCACCGCCGCCACAACAGCCGCCACCCCGCCGCCACCAACACCACGGTGAGCACGACCACCGGGGAGTCAGACGGGGAGGTGGAGGAGGCGGAGGACGGCGACCCGGAGGTGTGGGCGACCCTGAACAAGGGGTTCCGGCAGGTGCAGTCGGTGCTGGACCGGAACCGGCAACTGATTCAGCAGGTGAACGAGAACCAGCAGTCTCGGATGCACGACAACATGGTAAAAAACGTGTCCCTCATTCAGGAACTCAACGGCAACATCTCCAAGGTTGTCTCTCTCTACTCTGATCTCAACTCCAATTTCACCAACGTTTGCCAACACCGCTCCAAAAACCCTTCCAAATAA 420 0.5833 MNSSCSAADSTMEDPSNHRRSKKHHRRHNSRHPAATNTTVSTTTGESDGEVEEAEDGDPEVWATLNKGFRQVQSVLDRNRQLIQQVNENQQSRMHDNMVKNVSLIQELNGNISKVVSLYSDLNSNFTNVCQHRSKNPSK* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1210 139 PANTHER PROTEIN ELF4-LIKE 4 21 136 IPR040462 GO:0042753
Vra3g1210 139 MobiDBLite consensus disorder prediction 33 47 - -
Vra3g1210 139 MobiDBLite consensus disorder prediction 1 60 - -
Vra3g1210 139 Pfam Early Flowering 4 domain 57 135 IPR009741 -
Vra3g1210 139 PANTHER PROTEIN EARLY FLOWERING 4 21 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1210 Vra-Chr3 12859556 12860140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1210 - - var:108328510 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1210 3 12859556 12860140 Vra6g0594 6 5355101 5355699 PCT