Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0564 ATGGCAATTTTAGCTGAAGACTTCTTCAAAGAGAGGAAATACCCTTTCGTTTTCACTCTCTTAATCTTGCTTGTTTGTGTCGCGTTCTTCCTCTTCAGCTTCTCCAGCACCACCTCAAACCCTGTTGCTTTCTATTCTGTTATCCAACACCAAGCACCTCCTCATCATGCTTCAAAACCGAAAGTGCAAGAGCTTCCTCCAAAGGTGACCAATGTCACTGCTGAAGAAGACCAAGGTTTGCCCCCAGAGGAGGATGCTGTGACCATAGATTGGAAGCTGTGTAAGGACCCGCAGAATGTTGATTTTATACCATGTTTGGATAATTTTATGGCCATTAAGGCTCTTAAGTCGAGGAGGCACATGGAGCACAGGGAAAGACATTGCCCTGAGACTAGTCTTCACTGCTTGTTGCCTCTTCCCAAAGGGTATAAAGCCCCAGTTCCGTGGCCTAAGAGCAGGGATAAGATTTGGTATGATAATGTTCCTCATCCAAAGCTGGTGGAGTACAAGAAAGACCAGCACTGGGTAGTAAAGTCTGGAGAATATTTAGTTTTTCCTGGTGGTGGTACTCAATTCAAAGAAGGAGTAGATCATTACATTGAGTTCATACAGAAGACATTACCAGCAATTAAATGGGGAAAGCATACCAGGGTTGTTCTAGATGTTGGCTGTGGTGTTGCTAGCTTTGGTGGCTATTTGCTGGACAAAAATGTTATTACTATGTCATTTGCCCCAAAGGATGAACATGAAGCTCAGATACAGTTTGCCTTGGAACGAGGAATACCTGCAACTCTTTCTGTCATTGGAACACAGAAGTTGACTTTTCCTGATAACGGCTTTGATTTGATCCATTGTGCACGATGTAGGGTTCACTGGGATGCAGATGGTGGGAAGCCCTTATTTGAGCTCAACAGGATTCTTAGACCTGGTGGTTTCTTTGCATGGTCTGCAACACCAGTCTACCGAGATGATGAAAGAGATCAGAAAGTATGGAATGCCATGGTGGATATAACAAAAGCCATGTGCTGGAAGGTTGTGGCTAAGGCTCATGATTCATCTGGAATTGGACTTGTTATATACCAGAAGCCCACCTCATCTTCTTGCTATGAAAAACGTAAAGAGAACAATCCACCTTTATGTGAAAATGAAGATGGGAAGAACAGCTCATGGTATGCCAGACTCAATAGTTGCCTGACTCCTCTTCCGGTTGATGATAAGGGTAACCTGCAGAGCTGGCCTAAGTCTTGGCCCCAGAGGCTTACCAGTAAGCCACCTAGCTTACCTACTGATTCAGTTTCCAAGGATAAGTTCTTCAAGGACAGCAAACGCTGGTCTGAATTAGTTTCAGATGTTTATGTGAATGGTCTCCCTATAAATTGGTCAAGTGTTCGAAATGTAATGGACATGAATGCTGGTTATGCAGGATTTGCTGCTGCTCTCGTTGATCTTCCAGTGTGGGTGATGAATGTAGTACCTATTGATGTGCCTGATACTCTTAGTATTATAATGGACAGAGGGTTTATAGGAATGTATCATGATTGGTGCGAGTCCTTTAGTACCTATCCTCGCACATACGATCTTCTTCACTCTAGCTTTCTGTTCAAATATCTTGAGCCAAGATGTGACATTTTAGATGTGGCTGTGGAGATTGATCGCATATTGAGACCAAATGGATATCTCGTGGTTCACGATTCTATGGAGATGCTAAACAAGCTCACTCCAATTTTGCGTTCACTTCACTGGTCTGTCACGTTGCATCAGGATCAGTTTCTTGTAGCTAGGAAGGGTTTCTGGCGACCTACGAGCTCTTCAGACTGA 1818 0.4367 MAILAEDFFKERKYPFVFTLLILLVCVAFFLFSFSSTTSNPVAFYSVIQHQAPPHHASKPKVQELPPKVTNVTAEEDQGLPPEEDAVTIDWKLCKDPQNVDFIPCLDNFMAIKALKSRRHMEHRERHCPETSLHCLLPLPKGYKAPVPWPKSRDKIWYDNVPHPKLVEYKKDQHWVVKSGEYLVFPGGGTQFKEGVDHYIEFIQKTLPAIKWGKHTRVVLDVGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLFELNRILRPGGFFAWSATPVYRDDERDQKVWNAMVDITKAMCWKVVAKAHDSSGIGLVIYQKPTSSSCYEKRKENNPPLCENEDGKNSSWYARLNSCLTPLPVDDKGNLQSWPKSWPQRLTSKPPSLPTDSVSKDKFFKDSKRWSELVSDVYVNGLPINWSSVRNVMDMNAGYAGFAAALVDLPVWVMNVVPIDVPDTLSIIMDRGFIGMYHDWCESFSTYPRTYDLLHSSFLFKYLEPRCDILDVAVEIDRILRPNGYLVVHDSMEMLNKLTPILRSLHWSVTLHQDQFLVARKGFWRPTSSSD* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0564 605 CDD AdoMet_MTases 219 313 - -
Vra6g0564 605 PANTHER PMT16, PUTATIVE-RELATED 4 603 - -
Vra6g0564 605 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 603 IPR004159 GO:0008168
Vra6g0564 605 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 447 581 IPR029063 -
Vra6g0564 605 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 334 IPR029063 -
Vra6g0564 605 Gene3D Vaccinia Virus protein VP39 192 387 IPR029063 -
Vra6g0564 605 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 101 589 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0564 Vra-Chr6 4939383 4943586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0564 - - gmx:100800390 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1550 2 23401384 23406020 Vra6g0564 6 4939383 4943586 PCT