Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1550 ATGAGAATTTGGGTGGAAAGGCTGTTGAGAGAGAGAAAATGCCCTTTCATTTTCACCCTCTTGGTCTTTCTCGTTTGTGTGAGCATCCTCACGTTCACGAAAAACGTAACCTCTAACTTGGATCCCATAGGCTTCTATCTTGATGTGAAAGCGCAACCTCTGGCACATTTTTCTTCGCCGGCTCCCAAACGCCAAAGATTGCCACTCAAGGGAGAGCCTTTCTTGGATGATGCAAACATTGATTGGAAGCTTTGTAAGGGTCACTTCGCTTTCGACTATGTACCCTGTTTGGATAACCTTAAGGTAATTAAAGCTCTCAGGACAAGGAGGCACATGGAACACAGGGAAAGACACTGTCCTAATTCTCCTCTCCACTGTCTGGTGCCCCTTCCCAGAGGCTACAAACTCCCCCTTCTGTGGCCTAAGAGCAGGGACATGATTTGGTATGATAATGTCCCTCATCCGAAGCTGGTTGAATACAAGAAGGAGCAAAACTGGGTGGTGAAGTCCGGAGATTATCTCGTCTTTCCCGGAGGTGGTACTCAGTTTAAAGAAGGTGTTAACCATTATACTGAATACATAGAGAAGACACTACCGACAATTCAATGGGGAAAGAATATCAGGGTTGTTCTTGACGTTGGTTGTGGAGTTGCTAGCTTTGGTGGCTATCTTATGGACAAAAATGTTATTACTATGTCATTTGCACCAAAGGATGAGCATGAAGCTCAGATACAGTTTGCATTGGAACGAGGAATTCCTGCAACTCATTCTGTTATTGGAACTCAAAAGTTGACATTTCCTGATAATGGATTTGATTTGGTACACTGTGCAAGATGCAGGGTGCATTGGGATGCAGACGGTGGGAAACCGTTGTTTGAGCTGAACAGGATTCTTAGACCTGGTGGTTTCTTTGCTTGGTCTGCAACACCAGTTTATCGCGATGATGAAAGAGATCGCAAAGTATGGAATGCCATGGTGACAGTAACAAAAGCAATGTGCTGGAGTGTTGTGGCTAAGACTCTGGACTCATCTGGTATTGGGCTTGTTATATACCAGAAGCCTAACTCATCTTCTTGTTATCAGGAACGCAAAGAGAATACTCCTCCTTTATGTGAATATAGCGACAAGAAAAGCATCTCATCCTGGTATGCCAAACTCAGTGGTTGCCTCATTCCACTTCCAGTTGATGGTAAGGGTAACATTCAGAGCTGGCCAATGTCTTGGCCCCAAAGGCTTACTGGTATACCTCCAAGCTTATCGAGTGAATCAGATGTCACTGAGAAGTTCTTGAATGACACCAAGCACTGGTCTGAACTAGTTTCAGACGTTTATATAGATGGTCTTTCTATAAACTGGTCAAGTATTCGAAATGTAATGGACATGAATGCTGGTTATGCAGGATTTGCCGCGTCACTCATTGATCTACCAGTGTGGGTGATGAATGTAGTACCCATTGACATGCCAGATACTCTTACTACTATATTTGACCGAGGGCTAATAGGATTATATCATGACTGGTGCGAGTCCTTGAGTACATACCCTCGCACCTATGATCTTGTTCATGCAAGCTTTCTTTTCAAACATCTTGAGCAAAGATGTGAGATTGTAGATGTGGTTGTGGAGATAGATCGCATACTGAGACCAGATGGGTATGTACTGGTTCAGGACACCGTGGAAATGATGAACAAGCTTGGTCCGGTTCTGCATTCACTTCATTGGTCTGTAACATTGTATCAAAATCGGTTTCTTGTTGGTAAGAAGAGTTTCTGGCGTCCAAGACCTTAG 1785 0.4387 MRIWVERLLRERKCPFIFTLLVFLVCVSILTFTKNVTSNLDPIGFYLDVKAQPLAHFSSPAPKRQRLPLKGEPFLDDANIDWKLCKGHFAFDYVPCLDNLKVIKALRTRRHMEHRERHCPNSPLHCLVPLPRGYKLPLLWPKSRDMIWYDNVPHPKLVEYKKEQNWVVKSGDYLVFPGGGTQFKEGVNHYTEYIEKTLPTIQWGKNIRVVLDVGCGVASFGGYLMDKNVITMSFAPKDEHEAQIQFALERGIPATHSVIGTQKLTFPDNGFDLVHCARCRVHWDADGGKPLFELNRILRPGGFFAWSATPVYRDDERDRKVWNAMVTVTKAMCWSVVAKTLDSSGIGLVIYQKPNSSSCYQERKENTPPLCEYSDKKSISSWYAKLSGCLIPLPVDGKGNIQSWPMSWPQRLTGIPPSLSSESDVTEKFLNDTKHWSELVSDVYIDGLSINWSSIRNVMDMNAGYAGFAASLIDLPVWVMNVVPIDMPDTLTTIFDRGLIGLYHDWCESLSTYPRTYDLVHASFLFKHLEQRCEIVDVVVEIDRILRPDGYVLVQDTVEMMNKLGPVLHSLHWSVTLYQNRFLVGKKSFWRPRP* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1550 594 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 92 580 IPR004159 GO:0008168
Vra2g1550 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 452 573 IPR029063 -
Vra2g1550 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 333 IPR029063 -
Vra2g1550 594 Gene3D Vaccinia Virus protein VP39 457 592 IPR029063 -
Vra2g1550 594 Gene3D Vaccinia Virus protein VP39 182 380 IPR029063 -
Vra2g1550 594 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 593 IPR004159 GO:0008168
Vra2g1550 594 PANTHER PMT16, PUTATIVE-RELATED 4 593 - -
Vra2g1550 594 CDD AdoMet_MTases 210 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1550 Vra-Chr2 23401384 23406020 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1550 - - gmx:100808221 1072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1550 2 23401384 23406020 Vra6g0564 6 4939383 4943586 PCT