Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0560 ATGCTTCTCCGAACCGCTGCTGCTTCGTCACTCTCCCTCTTCAACCCCAACGCCGAACCTCCGCGTTCGGTTCACGTTCAGGCGAACAACACCACCCGCTTGGTGGTCCGCGCCGCAAAAGGATCCACGAACCACCGCGCCCTAACTGGCGTGATTTTTGAACCGTTCGAGGAGGTGAAGAAGGAGCTAGATCTCGTTCCCACCGTTCCTCAAGCTTCTCTCGCGCGCCAAAAATACGTTGACGAATCTGAAGCTGCCGTTAACGAACAAATCAATGTGGAGTATAATGTTTCGTACGTGTATCATGCTCTGTTTGCGTACTTCGATAGGGATAACGTTGCGCTGAGAGGTCTTGCTAAGTTTTTTAAGGAATCGAGTGAAGAAGAACGAGAGCATGCTGAGAAATTGATGGAGTATCAGAACAAGCGTGGTGGAAAAGTGAAGTTGCAGTCAATTGTGATGCCGCTTTCTGAGTTTGATCATGCAGATAAAGGGGATGCACTGTACGCAATGGAACTGGCTCTCTCATTAGAGAAGCTAACGAACGAAAAGCTCCTTCAGTTGCACAGTGTTGCCACGAAGAACGGTGATGTGCAGTTGGCAGACTTCGTTGAAAGCGAATTTCTGGGTGAACAGGTGGAATCCATCAAAAGAATATCTGAGTATGTTGCTCAGCTCAGAAGAGTGGGCAAAGGACATGGTGTGTGGCACTTTGATCAGATGCTCCTCCATGAGGGAGGACATGCAGCTTGA 753 0.4927 MLLRTAAASSLSLFNPNAEPPRSVHVQANNTTRLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHADKGDALYAMELALSLEKLTNEKLLQLHSVATKNGDVQLADFVESEFLGEQVESIKRISEYVAQLRRVGKGHGVWHFDQMLLHEGGHAA* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0560 250 PANTHER FERRITIN 25 249 IPR001519 GO:0006826|GO:0006879|GO:0008199
Vra6g0560 250 PANTHER FERRITIN 25 249 - -
Vra6g0560 250 Pfam Ferritin-like domain 85 229 IPR008331 GO:0008199
Vra6g0560 250 Coils Coil 122 143 - -
Vra6g0560 250 CDD Euk_Ferritin 81 240 - -
Vra6g0560 250 ProSiteProfiles Ferritin-like diiron domain profile. 77 230 IPR009040 -
Vra6g0560 250 SUPERFAMILY Ferritin-like 71 244 IPR009078 -
Vra6g0560 250 ProSitePatterns Ferritin iron-binding regions signature 2. 197 217 IPR014034 -
Vra6g0560 250 Gene3D - 45 246 IPR012347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0560 Vra-Chr6 4912411 4915170 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0560 K00522 - gmx:547477 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0560 6 4912411 4915170 Vra6g0560 6 4912411 4915170 ECH
Vra2g1548 2 23393962 23396361 Vra6g0560 6 4912411 4915170 PCT