Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1548 ATGCTTCTCAGAACCGCTTCTTCTTTCTCTCTGCTCAACGCCAACGCCGACGCCGACCATATACTCCCTCTCATAAACCCTTCTTCTGCTATTCGTTGCTACTCTCATGCCAAAAGCTTCGTTCCCTGCGCCACCAAGGGCTCAAACAACCGTCCCTTAACCGGCGTCGTTTTTGAACCCTTTGAAGAGGTCAAGAAGGAGCTCGACCTTGTCCCCACACTTCCAGAAGCTTCCCTTGCTCGCCAGAAGTACACCAATGAGTCTGAAGCTGTTGTCAACGAACAGATCAATGTGGAGTACAATGTTTCGTATGTTTATCATGCGATGTTTGCCTACTTCGACAGGGACAATGTTGCGCTCAAGGGTCTTGCCAAATTTTTTAAGGAGTCAAGTGAGGAGGAAAGGGAGCATGCTGAGAAATTGATTGAATATCAGAATAAACGTGGTGGAAAAGTGAAGTTGCAATCTATTGTGATGCCTCTTTCTGAGTTTGACCACGATGAAAAGGGAGATGCCCTGTATGCAATGGAACTTGCTCTGTCTTTGGAGAAGCTGACAAATGAGAAGCTTCTTAACTTGCACAGTGTTGCCTCGAAGAACAATGATGTGCAATTGACAGATTTTATTGAAAGCGAATTTTTAGGTGAACAGGTCGAAGCTATTAAAAAAATCTCTGAGTACGTTGCTCAGCTCAGAAGAGTTGGCAAAGGACATGGTGTGTGGCACTTTGATCAAATGCTGCTCCGTGAGGAGGGAGTTAATGTTTGA 768 0.4531 MLLRTASSFSLLNANADADHILPLINPSSAIRCYSHAKSFVPCATKGSNNRPLTGVVFEPFEEVKKELDLVPTLPEASLARQKYTNESEAVVNEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLIEYQNKRGGKVKLQSIVMPLSEFDHDEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLTDFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLREEGVNV* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1548 255 PANTHER FERRITIN 1 253 IPR001519 GO:0006826|GO:0006879|GO:0008199
Vra2g1548 255 SUPERFAMILY Ferritin-like 76 249 IPR009078 -
Vra2g1548 255 CDD Euk_Ferritin 86 245 - -
Vra2g1548 255 ProSitePatterns Ferritin iron-binding regions signature 2. 202 222 IPR014034 -
Vra2g1548 255 Pfam Ferritin-like domain 92 234 IPR008331 GO:0008199
Vra2g1548 255 Coils Coil 128 148 - -
Vra2g1548 255 Gene3D - 51 252 IPR012347 -
Vra2g1548 255 ProSiteProfiles Ferritin-like diiron domain profile. 82 235 IPR009040 -
Vra2g1548 255 PANTHER FERRITIN-2, CHLOROPLASTIC 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1548 Vra-Chr2 23393962 23396361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1548 K00522 - gmx:547476 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1548 2 23393962 23396361 Vra6g0560 6 4912411 4915170 PCT