Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0557 ATGAAGGCGCCATTATCAGGTTCTTCTTCCCTTCTGAGAGGCAAGGGACGTCTCTCTCCATACCTTTTCACACTCATAGCTTTCATCCTCTTCGTTGCCATTCTCTATGGCCAAGATTTCATGTGCGTCTTTGACGAACACCTCCAAAGCTACTCTTATTCTGACAAACCCACTTCCACAACTCAAAGAGTGAAACAACATAAGGTGCCGTTTGCCGTCGGAAAAACAGAGGAAGGATGTGACATCTTCAGTGGAAGTTGGGTTCGAGACGAGTTGAATCGACCATTGTACGAGGAATCAGAATGTCCATACATTCAACCACAATTAACTTGTCAAGAACATGGACGACCCGATAAGGATTATCAACACTGGAGATGGCAACCACATCATTGTGACCTTCCTATATTCAATGCTAGTTTGGTGCTTGAAACACTTCGAGGAAAAAGGATGATGTTTGTTGGTGATTCTCTTAATCGCGGTCAATATGTCTCTTTTGTATGCCTTCTCCATAAACTCATTCCTGATGATGAAAAATCAATGGAAACCTTTGATTCACTCACAGTGTTCACTGCAAAGGAATACAATACCACAATTGAGTTCTACTGGGCACCTTTTCTTCTTGAATCAAACTCAGACAATGCTGTCATTCATAGAATATCTGATAGGATTGTTAGAAAAGGTTCAATCAATAAGCATGGCAAGAATTGGAAAGGTGTTGACATTGTAGTATTCAACACCTATCTTTGGTGGATGACTGGCTTGAAGATGAAAGTATTACTTGGATCTTTCGATGATGAAGTAAAAGAGATTGTTGAGCTCTCAACAGAGGATGCGTATCGTATGGCAATGAAAAGTATGCTTAGATGGGTTAGGTTGAACATGGATCCGAAGAAAACTAGAGTGTTTTTCACAAGCATGTCACCCTCCCATGGAAAGAGCATAGATTGGGGAGATGAAGAAGGAGGAAATTGTTACAATGAAACAAGTTTAATCGATGATCGAAGCTATTGGGGCTCAGATTGTAGGAAGAGTATAATGGAAGTAATTGGAGAAGTGTTTAGGAAATCTAAAGTGCCTATTACGTTTTTGAACATTACACAATTGTCCAGTTATCGTAGAGATGCACACACTTCAATATATAAGAAACAATGGAGTCCATTGACTCCAGAGCAATTAGCTAACCCGGTTAGCTATGCTGATTGTGTACATTGGTGTTTACCTGGCCTTCAAGATACTTGGAATGAGCTTCTCTTTGCCAAGTTATTTTATCCTTGA 1275 0.4016 MKAPLSGSSSLLRGKGRLSPYLFTLIAFILFVAILYGQDFMCVFDEHLQSYSYSDKPTSTTQRVKQHKVPFAVGKTEEGCDIFSGSWVRDELNRPLYEESECPYIQPQLTCQEHGRPDKDYQHWRWQPHHCDLPIFNASLVLETLRGKRMMFVGDSLNRGQYVSFVCLLHKLIPDDEKSMETFDSLTVFTAKEYNTTIEFYWAPFLLESNSDNAVIHRISDRIVRKGSINKHGKNWKGVDIVVFNTYLWWMTGLKMKVLLGSFDDEVKEIVELSTEDAYRMAMKSMLRWVRLNMDPKKTRVFFTSMSPSHGKSIDWGDEEGGNCYNETSLIDDRSYWGSDCRKSIMEVIGEVFRKSKVPITFLNITQLSSYRRDAHTSIYKKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFAKLFYP* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0557 424 Pfam PMR5 N terminal Domain 79 132 IPR025846 -
Vra6g0557 424 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 10 424 IPR029962 GO:0016413
Vra6g0557 424 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 10 424 - -
Vra6g0557 424 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 133 419 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0557 Vra-Chr6 4861671 4864895 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0557 - - gmx:100785571 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0557 6 4861671 4864895 Vra6g0557 6 4861671 4864895 ECH
Vra2g1543 2 23342085 23345647 Vra6g0557 6 4861671 4864895 PCT