Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1543 ATGGAAAATTTGATGAAGGCATCGTCTTCCTCCTTCTTCCCTTCACTTCTGAGAGTGAAGCCTCGCTCCTCTTCTTACCTCTTCACCCTCTTAGCTTTCATTCTCTTCGCTACGATCATCTCTGGTCATGACTTTCTCTTAATCTTGCATCCATACCCTAAGGATCAAACACAAACCCTCTTCTTCTCTACACCCCGAAACACGACGACGGTGACAGAAACCAAAAGAGAAGAAGGAGGAGGGTGTGACGTGTTCCAGGGAAGGTGGGTACGCGACGAGTTGACTCGCCCACTGTACGAGGAATCGGATTGTCCCTACATACAGCCCCAGTTAACATGTCAAGAACACGGTCGGCCTGAGAAGGAGTATCAACGATGGCGATGGCAACCTCACGGTTGCGATCTTCCCACATTCAATGCAAGTTTAATGCTGGAGAAAGTTCGTGGGAAGAGGATGATGTTTGTTGGAGACTCTCTGAACCGAGGTCAATATGTCTCTTTGGTATGTCTTCTCCATCACCTCATTCCTGAACATGCCAAATCCATGGAAACTCTTGGTTCCCTCACCATCTTTAGAGCCAAGGAATACAATGCCACAATTGAGTTTTACTGGGCACCTTTTCTACTTGAATCAAACTCCGATAATGCTGTGATCCATAGGGTAACTGATAGAATAGTGAGAAAGGGTTCAATCAACACTCATGGTCGTCACTGGAAAGGTGCTGACATTATCGTATTCAACACTTATCTTTGGTGGATAACTGGATCTAAGATGAAGATCTTGCTTGGATCTTTTAATGATGAAGTAAAGAAGACTGTTGAGATGTCAACAGAAGATGCTTATCGTATGGCTATGAAAAGTATGGTTAGATGGGTGAAGTTGAACATGGACTCCAACACGACAAGAGTATTCTTCACCAGCATGTCACCTTCTCATGCAAAAAGCATAGAGTGGGGAAGAGAATCAGAAGGGAATTGCTACAATGAAACAACACCAATTGATGATCCAACATATTGGGGTTCTGATTCTAAAAGAACCATAATGCAAGTAATTGGAGAAGTGTTTGGAAAATCGAAAGTACCTATAACTTTTCTCAACATTACTCAACTTTCCAACTACCGAAAAGATGCACACACGTCAATTTACAAGAAGCAATGGAACCCATTGACTTCAGAGCAACTGGCTAACCCTGCTAGCTACGCTGATTGTGTGCATTGGTGTTTGCCAGGACTTCAAGACACTTGGAACGAACTTTTGTTTGCTAAGTTATTTTTTCCTTAA 1281 0.4309 MENLMKASSSSFFPSLLRVKPRSSSYLFTLLAFILFATIISGHDFLLILHPYPKDQTQTLFFSTPRNTTTVTETKREEGGGCDVFQGRWVRDELTRPLYEESDCPYIQPQLTCQEHGRPEKEYQRWRWQPHGCDLPTFNASLMLEKVRGKRMMFVGDSLNRGQYVSLVCLLHHLIPEHAKSMETLGSLTIFRAKEYNATIEFYWAPFLLESNSDNAVIHRVTDRIVRKGSINTHGRHWKGADIIVFNTYLWWITGSKMKILLGSFNDEVKKTVEMSTEDAYRMAMKSMVRWVKLNMDSNTTRVFFTSMSPSHAKSIEWGRESEGNCYNETTPIDDPTYWGSDSKRTIMQVIGEVFGKSKVPITFLNITQLSNYRKDAHTSIYKKQWNPLTSEQLANPASYADCVHWCLPGLQDTWNELLFAKLFFP* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1543 426 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 135 421 IPR026057 GO:0016740
Vra2g1543 426 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 13 426 - -
Vra2g1543 426 Pfam PMR5 N terminal Domain 81 134 IPR025846 -
Vra2g1543 426 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 13 426 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1543 Vra-Chr2 23342085 23345647 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1543 - - gmx:100782397 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1543 2 23342085 23345647 Vra6g0557 6 4861671 4864895 PCT