Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0556 ATGACTTGCCCTATACAACTCCACCGATTCAACCCTACAACCGATGCATCCACCGCCATAGCAAACGGCGTTAACTGTCCCAAGCCACCGCAGACGCCGCCGTCAACGCGACGTCTCTTGCCCAAAGGAAGCGTGCCGGATGCGGCGGCGCGCCACCACACGCACGCGGTGGGCCCCGGCCAGTGCTGCTCCGTCGTCATTCAGGCGATCGAGGCGCCGGTCTCCGCCGTGTGGCCCGTGGTGCGACGCTTCGACAATCCGCAAGGGTACAAGCACTTCGTGAAGAGCTGCCACGTGGTCGCCGGCGACGGCATTCGCGTTGGCGCGCTCCGCGAGGTGCGCGTGGTCTCTGGCCTCCCGGCTGTTTCGAGCACCGAGCGCCTCGAGATCCTTGACGACGAGCGGCACGTGATGAGCTTCAGCGTGATCGGCGGCGACCACCGCCTGAGGAACTATCGGTCTGTGACGACGCTCCACGGTGACGGTAACGGAGGCACGGTTGTGATCGAGTCCTACGTGGTTGACGTACCGCCAGGTAACACTAAGGAGGAGACTTGCGTCTTCGTGGACACAATCGTACGGTGCAATCTGCACTCCCTCGCTCAGATCGCTGAAAACATGGCAAGTCAACACTGA 636 0.6258 MTCPIQLHRFNPTTDASTAIANGVNCPKPPQTPPSTRRLLPKGSVPDAAARHHTHAVGPGQCCSVVIQAIEAPVSAVWPVVRRFDNPQGYKHFVKSCHVVAGDGIRVGALREVRVVSGLPAVSSTERLEILDDERHVMSFSVIGGDHRLRNYRSVTTLHGDGNGGTVVIESYVVDVPPGNTKEETCVFVDTIVRCNLHSLAQIAENMASQH* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0556 211 MobiDBLite consensus disorder prediction 19 53 - -
Vra6g0556 211 Pfam Polyketide cyclase / dehydrase and lipid transport 68 205 IPR019587 -
Vra6g0556 211 CDD PYR_PYL_RCAR_like 62 205 - -
Vra6g0556 211 SUPERFAMILY Bet v1-like 62 203 - -
Vra6g0556 211 PANTHER - 29 208 - -
Vra6g0556 211 Gene3D - 38 211 IPR023393 -
Vra6g0556 211 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 29 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0556 Vra-Chr6 4848103 4849338 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0556 K14496 - gmx:100804400 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0556 6 4848103 4849338 Vra6g0556 6 4848103 4849338 ECH
Vra2g1542 2 23334982 23336136 Vra6g0556 6 4848103 4849338 PCT