Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1542 ATGCCTTCTTCCCTTCACTTCCAAAGGTTCAATCCTATAACCGACGCCGCCACCATCTCTTCCGCCGCAATCGCCAACGGCGTAAACTGCCCCAAACAGTCTCAAGCGCCGCCTCCCGCCGTCGCCCGTCGTCTCCTCATCCCCTCTCTCCCCGACGCGGTGGCGCGGCACCACGCGCTCGTGGCGGGGCCCAACCAGTGCTGCTCCGTGGTGGTCCAACCTATCAGCGCCCCCGTCTCCGCCGTGTGGGCGGTGGTGCGGCGCTTCGACCATCCGCAGGGCTACAAGAACTTCGTGAAGAGCTGCCACGTCATCACCGGCGACGGCATTCGTGTGGGCGCCGTCCGCGAGGTGAGGGTGGTGTCGGGGCTCCCCGCGGAGTCGAGCACCGAGCGTCTGGAGATCCTGGACGACGAGCGCCACGTCATGAGCTTCAGCGTGGTAGGCGGGAACCACCGGCTGAGAAATTACAGGTCGGTGACGACGCTTCACGCTAGCGGGAACGGGACGCTTGTTATCGAGTCGTATGTGGTGGACGTACCGCAGGGTAACACTAAGGAGGAAACGTGCGTGTTCGTCGACACCATTGTACGTTGCAACTTGCAGTCGCTGGCTCAGATCGCTGAAAATAGGACTCCAATCTCTGAACAACCAAACTGTTGA 663 0.6199 MPSSLHFQRFNPITDAATISSAAIANGVNCPKQSQAPPPAVARRLLIPSLPDAVARHHALVAGPNQCCSVVVQPISAPVSAVWAVVRRFDHPQGYKNFVKSCHVITGDGIRVGAVREVRVVSGLPAESSTERLEILDDERHVMSFSVVGGNHRLRNYRSVTTLHASGNGTLVIESYVVDVPQGNTKEETCVFVDTIVRCNLQSLAQIAENRTPISEQPNC* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1542 220 CDD PYR_PYL_RCAR_like 67 209 - -
Vra2g1542 220 PANTHER - 32 217 - -
Vra2g1542 220 SUPERFAMILY Bet v1-like 67 208 - -
Vra2g1542 220 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 32 217 - -
Vra2g1542 220 Pfam Polyketide cyclase / dehydrase and lipid transport 68 209 IPR019587 -
Vra2g1542 220 Gene3D - 32 219 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1542 Vra-Chr2 23334982 23336136 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1542 K14496 - gmx:100808416 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1542 2 23334982 23336136 Vra6g0556 6 4848103 4849338 PCT