Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0546 ATGGCAAATGTGGTGGAACTCAAGGTTGGTTTACACTGTGACGACTGTATCAAGAAAATTCTTAAGGCCATCAAGAAGATTCAAGATATTGAGACATATAACGTGGAGAAACAGTCGAACAAGGTGATTGTTACGGGAAATGTTACAACGGAAGAAGTTATTAAGGTTCTTCATAAGATTGGCAAGCATGCAACCCCATGGGAAGAAGCTCAAACCCAACCCAATTGCTGA 231 0.4069 MANVVELKVGLHCDDCIKKILKAIKKIQDIETYNVEKQSNKVIVTGNVTTEEVIKVLHKIGKHATPWEEAQTQPNC* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0546 76 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 73 IPR045181 GO:0046872
Vra6g0546 76 ProSiteProfiles Heavy-metal-associated domain profile. 10 66 IPR006121 GO:0046872
Vra6g0546 76 SUPERFAMILY HMA, heavy metal-associated domain 3 68 IPR036163 GO:0046872
Vra6g0546 76 Pfam Heavy-metal-associated domain 8 63 IPR006121 GO:0046872
Vra6g0546 76 Gene3D - 2 66 - -
Vra6g0546 76 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 2 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0546 Vra-Chr6 4751607 4752633 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0546 - - gmx:100782367 112.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1534 2 23266499 23267386 Vra6g0546 6 4751607 4752633 PCT