Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1534 ATGGCAAATGTTGTGGAAGTGAAAGTTGGTTTGCACTGTGACGATTGTATCAAGAAAATCCTCAAAGCCATAAAGAAGATAGAAGACATTGAAACGTATAACGTCGACACAAAACTGAACAAGGTGATCGTTACTGGCAACGTCACAACAGAAAAAGTTATCAGGGTCCTTCAAAAGATTGGCAAAAATGCAATTGTCTGGAAAGATGATCAAAGCGATAACTCAGTAGTTTAG 234 0.3803 MANVVEVKVGLHCDDCIKKILKAIKKIEDIETYNVDTKLNKVIVTGNVTTEKVIRVLQKIGKNAIVWKDDQSDNSVV* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1534 77 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 72 IPR045181 GO:0046872
Vra2g1534 77 ProSiteProfiles Heavy-metal-associated domain profile. 10 66 IPR006121 GO:0046872
Vra2g1534 77 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 2 72 - -
Vra2g1534 77 SUPERFAMILY HMA, heavy metal-associated domain 3 68 IPR036163 GO:0046872
Vra2g1534 77 Pfam Heavy-metal-associated domain 7 62 IPR006121 GO:0046872
Vra2g1534 77 Gene3D - 2 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1534 Vra-Chr2 23266499 23267386 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1534 - - vra:106755969 132.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1534 2 23266499 23267386 Vra6g0546 6 4751607 4752633 PCT