Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0544 ATGGTTTCGGTTGATAATGGTAAAGATGAAATTGAGGAACCTAATGGAAATAAAGTAAATGACGTTGCTTCCATAGATATTTCAACATCTGGAAGAACGCTGGTGGGCGATGAAAGCTCTCAGAAGAAGTTCCAGGGCACCTTGAGTTTTATCCCCAATAGGATCAGCTTGTTGAAATTTGGGTCTGCATCTGCCAAATTCAAGCGGCTTGCAACAGAAAAGGACCAGATTTCACAGGGTGTGCCTTCACCGAGTTCTCTTCGCTTGAGGGAGCGCTTCAGTGGCATGTTTGCTAAGAAACTTGACTGGGGTTCACTCAAGAAGATGTGTGTTGAATGGATTAGGGACCCAATGAACATGGCCCTTTTTGTGTGGATCTTGTGTGTTGCTGTTTCTGGTGCAATTCTGTTCCTTGTCATGACTGGCATGTTGAATGGTGTGATGCCAAGGAAGTCTCAGAGAAATGCATGGTTTGAAGTGAACAATCAAATACTCAATGCACTGTTTACACTGATGTGTTTGTACCAGCATCCAAAGAGGTGCTACCACCTTGTGCTTCTGTGCAGGTGGAGTCCACAAGATATCTCTAAACTTCGAAAGGTATATTGCAAGAATGGGACTTATAAGCCCCATGAGTGGGCACACATGATGGTAGTGATCATTCTCCTTAATTTGAACTGTTTTGCTCAATATGCACTTTGTGGTCTAAACTGGGGGTATAAAAGATCTGACCGCCCGGCCATAGGAGTTGGAATATGCATATCTTTTGCTATTGGTGCGCCTGCAGTGGCTGGTCTGTATTCCATTCTTAGCCCTCTAGGTAAAGATTATAATTCTCAGATGGATGAAGAAGCACAGGTTCAAGATTCTGTTCCTCAGAGGCAAGATCAGCTGAGAGTGAAATCATTTCAGAAGAAATATTCATTTGCATCCAGACAGCAACAGAGGGTTATTGAAAGTAGGCCACAGTGGAGTGGAGGAATACTTGACATTTGGAATGACATTTCGCAAGCATATCTGTCACTTTTCTGTACATTTTGTGTCTTTGGTTGGAACATGGAGAGACTTGGCTTTGGAAACATGTATGTTCACATTGCTACTTTTATGCTGTTCTGTATGGCTCCCTTCTGGATCTTTACCTTGGCTGCTGTTAATATTGAGAATGACACTGTTAGACAGGCTCTAGTGGCTACTGGGATCATTCTTTGTTTTTTTGGTGCACTCTATGGTGGCTTTTGGAGGATCCAAATGAGAAAAAGGTTCAATTTGCCTTCTTATAACTTTTGTTTTGGCAAACCTTCAGCTTCTGATTGCACACTTTGGTTATGTTGTTGCTGGTGCTCTCTTGCACAAGAAGTAAGGACGGCAAATAGTTATGACATTGTAGAAGACAAATTATGCAGGAAAGAAGGTTCTTACAGTGACCAGCAACCAATGTCACCTTTGCCTCGTGAAGATGTGGCATCAAGTAAATCTGGCACAAGTTCTCCTTTGGGTAACAACTCTTCCCCTTCTATGATCAAGCCATCCAGTCCTTTAAGTTCAAGTAGTTTCTTGAAGGAATATCGTAGCCCAGAGAGACCACTATCTACTGTGAAAGAAGAGCTTTCTGAAAGAGGTAAAGATGATACAATGAACCCACCTACTCCACCATTAATAAAAAGGGAATCTCTTAGTCCTTGA 1683 0.4225 MVSVDNGKDEIEEPNGNKVNDVASIDISTSGRTLVGDESSQKKFQGTLSFIPNRISLLKFGSASAKFKRLATEKDQISQGVPSPSSLRLRERFSGMFAKKLDWGSLKKMCVEWIRDPMNMALFVWILCVAVSGAILFLVMTGMLNGVMPRKSQRNAWFEVNNQILNALFTLMCLYQHPKRCYHLVLLCRWSPQDISKLRKVYCKNGTYKPHEWAHMMVVIILLNLNCFAQYALCGLNWGYKRSDRPAIGVGICISFAIGAPAVAGLYSILSPLGKDYNSQMDEEAQVQDSVPQRQDQLRVKSFQKKYSFASRQQQRVIESRPQWSGGILDIWNDISQAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFTLAAVNIENDTVRQALVATGIILCFFGALYGGFWRIQMRKRFNLPSYNFCFGKPSASDCTLWLCCCWCSLAQEVRTANSYDIVEDKLCRKEGSYSDQQPMSPLPREDVASSKSGTSSPLGNNSSPSMIKPSSPLSSSSFLKEYRSPERPLSTVKEELSERGKDDTMNPPTPPLIKRESLSP* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0544 560 PANTHER - 11 557 - -
Vra6g0544 560 MobiDBLite consensus disorder prediction 487 521 - -
Vra6g0544 560 MobiDBLite consensus disorder prediction 526 542 - -
Vra6g0544 560 PANTHER PLAC8 FAMILY PROTEIN-RELATED 11 557 - -
Vra6g0544 560 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 323 457 IPR006461 -
Vra6g0544 560 Pfam Protein of unknown function (DUF2985) 112 190 IPR021369 -
Vra6g0544 560 MobiDBLite consensus disorder prediction 472 560 - -
Vra6g0544 560 Pfam PLAC8 family 324 454 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0544 Vra-Chr6 4740319 4742904 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0544 - - gmx:100795088 989.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0544 6 4740319 4742904 Vra6g0544 6 4740319 4742904 ECH
Vra2g1531 2 23243541 23246143 Vra6g0544 6 4740319 4742904 PCT