Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1531 ATGGTATCGGTTGATAACGGGATTTTGAATCCCAAAGATGAAATTGAGGAATGTAATGGCAGTAAAGTGAAGGAGTTTGTTTCTATAGATATTTCAACTACTCGAGAAACATTTCTGAGCAGTGAGGATTCCCAGAGAAAGGTTGAAGAAGGCACTTTAAGTTCTTCTGTTTCTAATAGGATAAATTTTCTTAAATTTGGTTCGGCATCTGCCAAATTCAAGAGGCTTGCTATTGAGAGAGACAAGGTTTCAATATCTGTGCCTTCTCCTCGTTCAAAGGGCCTAGAAGCACGTTTCAGAGGCATGCTTGCTCTGAAACTTGATGGGGGTTCAGTCAAGAAGATGTGCGTAGAGTGGATTAAAAGTCCAGTGAACATGGCCCTTTTTGTGTGGATCACATGTGTTGCTATTTCGGGTGCAATTCTGTTCCTGGTCATGACAGGCATGTTGAATGGTGTGCTTCCGAAGAAGTCTCAGAGAAATGCATGGTTTGAAATAAATAACCAAATACTCAATGCATTGTTTACACTCATGTGCTTGTATCAACACCCTAAGAGGTTCTACCACCTTGTTCTTCTCATCAGATGGAAACCAAATGACATCTCTAAACTTAGAAATTTGTACTGCAAGAATGGTACTTACAAGCCCCATGAGTGGAAACATATGATGGTAGTGGTTATTCTCCTTCATGTTAACTGTTTCGCCCAATATGCAGTTTGTGCTCTAAACTTGGGTTATAAAAGATCTGAGAGACCCGCCATTGGAGTTGGAATATGTATGTCTTTTGCAATTGCTGCTCCTGCGGTTGCTGGTCTGTACACCATTCTCAGTCCACTTGGAAAGGACTATGACTGTGACACGGATGAAGAAGTACAGCTGAGAGAGAAACCATGCGAGAAGAAGTATTCATTTGCATCAAAAGATCAACAAAGATTTGTTGAAAATAGACCAAAGTGGAGTGGAGGAATACTTGACATTTGGAGCGATATTTCCTTAGCATATCTCTCACTTTTCTGCACCTTTTGTGTCTTTGGGTGGAATATGGAGAGACATGGCTTTGGAAACATGTATGTCCATATTGCAACTTTTATGCTATTTTGTATGGCACCTTTCTGGATTTTCATTTTGGCTTCCGTTAACATAGATGATGACAATATTAGGCTGGCTCTGGGAGCTGTTGGAATCGTTCTTTGTTTTCTTGGTTTACTGTATGGTGGATTTTGGAGGATCCAAATGAGAAAGAGGTTCAACTTACCTGCCTATGACTTCTGTTTTGGCAAACCTTCAGCTTCTGATTGCACACTTTGGCTATGTTGTTCTTGGTGCTCTCTTGCTCAAGAAGCAAGAACAGGAAATAACTACGATCTTGTGATAGATAAGTTCTCCAGGAAACAAACTGATGATACTGGCAACCAACCTTCAATCTCACCTTTGGCTAGGGAAGATGTAGTATCAACCAACTCTGGCACAAGTTCAGTGAGTGGCAACTCTTCACCTTTTATATTGAAAACCAATGTGTTAAAGGAAGATTATAGAGCAGATAGTATTGTAGAAAAAGAGAATTGTGAAAGAGGTGATGATGGAACAATGAATCCACCGGATCCTATATTCATACAAAGAGAGTGA 1626 0.4016 MVSVDNGILNPKDEIEECNGSKVKEFVSIDISTTRETFLSSEDSQRKVEEGTLSSSVSNRINFLKFGSASAKFKRLAIERDKVSISVPSPRSKGLEARFRGMLALKLDGGSVKKMCVEWIKSPVNMALFVWITCVAISGAILFLVMTGMLNGVLPKKSQRNAWFEINNQILNALFTLMCLYQHPKRFYHLVLLIRWKPNDISKLRNLYCKNGTYKPHEWKHMMVVVILLHVNCFAQYAVCALNLGYKRSERPAIGVGICMSFAIAAPAVAGLYTILSPLGKDYDCDTDEEVQLREKPCEKKYSFASKDQQRFVENRPKWSGGILDIWSDISLAYLSLFCTFCVFGWNMERHGFGNMYVHIATFMLFCMAPFWIFILASVNIDDDNIRLALGAVGIVLCFLGLLYGGFWRIQMRKRFNLPAYDFCFGKPSASDCTLWLCCSWCSLAQEARTGNNYDLVIDKFSRKQTDDTGNQPSISPLAREDVVSTNSGTSSVSGNSSPFILKTNVLKEDYRADSIVEKENCERGDDGTMNPPDPIFIQRE* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1531 541 Pfam PLAC8 family 319 449 IPR006461 -
Vra2g1531 541 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 539 - -
Vra2g1531 541 MobiDBLite consensus disorder prediction 467 496 - -
Vra2g1531 541 Pfam Protein of unknown function (DUF2985) 118 196 IPR021369 -
Vra2g1531 541 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 539 - -
Vra2g1531 541 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 318 450 IPR006461 -
Vra2g1531 541 MobiDBLite consensus disorder prediction 465 496 - -
Vra2g1531 541 MobiDBLite consensus disorder prediction 518 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1531 Vra-Chr2 23243541 23246143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1531 - - gmx:100811964 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1531 2 23243541 23246143 Vra6g0544 6 4740319 4742904 PCT