Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0532 ATGACCGACACCCGGAAACTTGCCGCAGCCGGTTTCCCGGCGACTTCGAGGGTGAAACCCGAGCCTGGTGTTGTACCCGGGTCAGGTCAGAACCCGGGGATTATAAGGTTTGGTTTGAGAGCTGAAATTGATACTTCGCCGCCGTTTGCGTCTGTCAAGGAAGCGGTGATCCGTTTCGAAGGAACCGGGCCGTGGACACCCTTTTGCAAATTCGGAGAGAACAGTGCTGAAGACTTTGACATAAAGAGAGTGGGGGAAGAAGCAGCAAAGTTAGAAAAGGATTTGATAGTGAAAGAACTCGAAACACTTGATGTGCTTGAAGAACTGGGAGCTACCAAAGCAATTTTGGAGGAATTGAAGCTGCAGCTACAATCAGAAGCATTGAATTGTTTTGCAACTCGAGGTGAAAATTCATGTGAACAGGCTGGAGCTGCTACTAGAAATTGTGTGAATGGTATCAACTATGAAGAGCAGACATTGCAAAGTTCGAGTCAGTGTTCACCTTTACCTGATCTGTTCTTAGTGGAGTTAAGACAAGCTAAAGTAAGTCTTGGTAAAACTATTAACGATCTTGGAGTAATACAATCCTCTGTTGAAGATTTAAATAAGAAAATGAAGAAGGAAAGGCTCTTTGTTGAGAGGGCACGAGAGAAGCTGGCATCGAAGTTTGCAGCTGTCTCTACTCATGAAGTAACCAAAACAGAAGCAGGGTTTAATCCTCCTGAAGCTACTGTAGAAACAGCTTGCACGTGTCACCATCCCCTTAATGGTGGGAGGAGTTTTGGATTTGATACTGGACAGTGCAATGGAATGAATGAAACAAGAAGCTCTGAAGTTTTAAGGCCCTTGCCTGAGTTTGGTGAGAATGGATTTAGTGTTAAGACTGCTGAGATGAGGTGGCTTGCAGCTAAAAAGATGGAAGAAGCTGCAATGGCGGCAGAAGCCGTTGCTCTTGCTGAAATTGAGGCTCTTTGTTGCCATGAGATATCATCTGAATTTTCTTTTCCAGAACATCAGAAAGTGACTTTTGCCTTAGGGGAGTGCTCTCCTCTAAATCCCGTAGTTCAGTTTCCTCAAGACTCAACATTGGAGAAGGTAACAGATTCCAAGTTCCAAATTGACAAAATAGGCATTTCTAAACTGGGTATTTTGAAAAAGTTTGAGGAAGCAACAGAGGAAGTTCTACGCAGCAAACAAGTCTTGACTGAGGCATTGAATAGTGTTGAAAGTGCAAACATAAAGCAGCTTGCTGCTGAAGAGGCTCTTCGGAGATGGATTCCTGAGAATGATCTAAAAGGGCAGACATTGACTAAGAGCAGCCTGTTCAATCAAGCTGGAATTTGTCAAGATTCTCCTCTACCAGATGTAATCCCATCAATTACAAATAACAATGATCCGAAGCATGCCTTAAGGTCTTCAGTTTCAATGAGAGATGTACTTAGCAAAAAGCCAGTTCTTGAAGATTGTAGTACAACAAAGGATATGCAAGAGCATTCTGGAAAGACAGTAGCCTTGAGTCAGATGCTTCGAGCATTGAAGGAGGACCAAACTCTGCCGACAATACCCGAGAAAGATATGAAGATTAATCAAAAGCAAAAGCAGTTCATAGCATCTAGGAAAAAGTTCAGTTTCATCCAAATATCACTCCCCTTGGGAAAGCGAAGTAAGAAGAAGACATGA 1680 0.4315 MTDTRKLAAAGFPATSRVKPEPGVVPGSGQNPGIIRFGLRAEIDTSPPFASVKEAVIRFEGTGPWTPFCKFGENSAEDFDIKRVGEEAAKLEKDLIVKELETLDVLEELGATKAILEELKLQLQSEALNCFATRGENSCEQAGAATRNCVNGINYEEQTLQSSSQCSPLPDLFLVELRQAKVSLGKTINDLGVIQSSVEDLNKKMKKERLFVERAREKLASKFAAVSTHEVTKTEAGFNPPEATVETACTCHHPLNGGRSFGFDTGQCNGMNETRSSEVLRPLPEFGENGFSVKTAEMRWLAAKKMEEAAMAAEAVALAEIEALCCHEISSEFSFPEHQKVTFALGECSPLNPVVQFPQDSTLEKVTDSKFQIDKIGISKLGILKKFEEATEEVLRSKQVLTEALNSVESANIKQLAAEEALRRWIPENDLKGQTLTKSSLFNQAGICQDSPLPDVIPSITNNNDPKHALRSSVSMRDVLSKKPVLEDCSTTKDMQEHSGKTVALSQMLRALKEDQTLPTIPEKDMKINQKQKQFIASRKKFSFIQISLPLGKRSKKKT* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0532 559 Coils Coil 81 101 - -
Vra6g0532 559 Coils Coil 198 218 - -
Vra6g0532 559 Pfam Weak chloroplast movement under blue light 41 154 IPR008545 -
Vra6g0532 559 Pfam Weak chloroplast movement under blue light 176 429 IPR008545 -
Vra6g0532 559 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 8 558 - -
Vra6g0532 559 Coils Coil 106 126 - -
Vra6g0532 559 PANTHER WEB FAMILY PLANT PROTEIN 8 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0532 Vra-Chr6 4647940 4650478 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0532 - - gmx:100781281 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0532 6 4647940 4650478 Vra6g0532 6 4647940 4650478 ECH
Vra2g1519 2 23173886 23177169 Vra6g0532 6 4647940 4650478 PCT