Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0168 ATGAGGCAATTCAGTAATGCACAAACATCAGAGACTCGCTTTTCTGGTACCATTTCATCCACATCTCTCAGAAACTTTCTTCCCAGATCATTCTCTTCCAAGCACAAACCCACTTCAATCTCTAAAATCCCAAATTCAGATGCAGAGAACACTCCCCCCACCGATCCCAACATCTTGTACAACCATGACCAATCGTTGCCTTCTACAATCAACCAATCACTCTCAAAAAACTCAACTTCTCAGAACAACCTCCACCAATCGAAACCCCCCTTTGAATTAGATCCCCCAGTGAAGGTTGTAGTTCGAATCAGACCTACCAACAACAATGGAATAGAGGGAGATCGAACTGTTAAGAAGGTTTCTTCTGACACCTTGTGTGTCGGAGATAGGCAATTTACCTTTGATTCAGTTTTTGATTCGAACACCAATCAGGAAGATATTTTTCAGTCAGTGGGTGTCCCATTGGTTAAAAATGCTTTGGATGGTTACAACACTTCAATTCTGTCATATGGCCAGTCTGGAAGTGGAAAGACTTATACGATGTGGGGTCCCCCAAGTGCCATGTTTGAGGAGCCTTCGCCTCAAAGTCACAAGGGAATTGTTCCTCGGATCTTCCAAATGTTGTTTTCTGAGCTTGACAGAGAGCAGCAGGCGTCTGATGGGAAACAATTCAATTATCAATGTCGATGTTCTTTTCTTGAGATATACAATGAACAAATTGGGGACTTACTTGATCCAACCCAGCGCAACCTTGAGATGAAAGACGATAACAAAAATGCGTTGTATATAGAGAATCTGACTGAGGAATATGTTACTAGCTATGATGATGTGACACAAATTCTGATTAAGGGACTTTCAAGCAGAAAAGTTGGAGCAACAAGCTTAAATTCCAAGAGCTCTAGGTCACATATCATTTTCACGTTTGTCATTGAATCTTGGTGTAAGGGAATATCATCAAAGGGTTTCAGTAGTTCAAAATCTAGCAGAATTAGCCTTATTGATCTTGCTGGACAGGATAGAAACAAAATTGAGGATGCAGGCAAGCAATGTCTAAAGGAAAGCAAAAATGTAAAGAAGTCCTTATCTCAGCTCGGGCATTTAGTGGATGTCCTGACTAAAGAAACACTCTCCGGAAAAGCAGAAGAAATTTCAAACAGGAATTCCTGTTTAACACGTTTACTGCAAGAATCACTTGGTGGAAATGCCAAACTCTCGTTAATATGTTCCATCTCCCCCGATAACAAGAATACTGGCGAAACTTTGCGCACACTAAGGTTTGGACAGCGAGTAAGAACCATTAGAAATGAACCTGTTATCAATGAGATAAAGGAGGATGATGTTAATGATTTAAGTGATCAAATCCGGCAACTGAAGGAAGAACTTATTAGAGCAAAGGCTGAGGTTCGTTGCTCCGATGGGATTAAAAATGGATACTTCCAAGGACGTAATGTACGGGACAGTCTCAATCAGCTGCGTGTCAGCTTAAACCGCTCTATACTCCTACCTTGTATTGACAAAGACACTGATGAAGAGGTGAATGTGGACGAGGAAGACATAAGGCAGTTACGCCAGCAGATTGATGAATTGTATCATTCATGTGAAGGGAATCCTACAAACATATCTGTCGGTGAAGATAGTGTCCAATTTTATTCTGTTGCAGAAATTTGTGATGCAGATATGACCGGTGGTGATGAAATTGAAATAGAGGAGGAAGGATGTTTTGAAGACACACTGTGTAAGCCTTGTCCCGAGGAAAGTGAGGGATCAACTACCGTCTTGTATACTTCAGCTGATGACTTTGCAAGTACAGCTAATGCCTCAAGGTCAATTAAATCTACATTCAGAGATAGCATTTCAGTTAGCTCATGTGGTCGATCTCCAATACTTGAGGAACCACCGTTGTCCGAGTCTCCAAAAATAAAAAATGTCCAGAGGAAAAGTGTGGCTTATACATCAAGTTGTCTGGGAAGTTGGAACAATGTGGCAGAGGAGAATTTTAGTTCGAGTAAAGAGGGTGAGAAGATGCGATTGTCGCTACGATCAAGCAAGGTTTTTCCAGGTCCTACAGAATCCTTGGCCGCAAGCCTTCAAAGGGGATTGCAGATAATTGATTATCATCAGCGAAACTCAACATTGAACAAATCTTCAGCTTCCTTCTCTTTTGATCACTTAACCTTGAGACCTTGTTCAGAAATAGACAAGGACGATTCTGGAGATCAAGTAACGCAACAGAAGAAATATTCTGTCGACGAAAGTACTGCTACCTTGCTTTGTGAACCTTGCCGTAAGAGAATATGCAATCAGGATACTACTGAGGTCCAAGGAAACGTAAAATCAAGGATTGAAACTGAAGCAGAAAATCCAGATGGACTGACAGATAAAGTTTCAGAAGATTCCCAGAGTATAATGGAAAAAGCGATCACAAGAGAAAAGGAGCTAGAGAATGTTTGCAAGGAGCAAGCTGCTAAAATAGAAGAACTAAATCAATTGGTGGAGAAATTGAAAGGAGAAAAAGAACTACAATCTTCCATCATTGTATATGATCCTGAGAGAAACAAACAGACTAGACATGAAGATAGTAACTTGTTGAATGATGAAGACAGGCTTCCAAGAGGCACTTCATTAGACAAATGTTTACCAGATATTGTGGAGGAAAAATGTGAAATTAAGGAAGTAAAGGAAGTACAGGAAGTAGTAACTAATGGAGACGGCTCTTTTGATGCAGCTGAGAAAGAAGAACTTCTCAAGGAGATTCAAAATCTAAGAAGCAAGCTGCAAATATGTAGCGATGTAACTGTAAGAAAGTCCACCGACAAACTAAGATCGTCATTATCTTTAATGTCAAGATCCATTCAACAGCGAAAAAGTGCTGTATTTTCTCAAGATAATAACGGAGATGAGCTTGAGAAAGAGAGACAGAGATGGACAGAAATGGAAAGTGAGTGGATTTGTTTGACTGATGAACTAAGAGTTGATCTCGAATCTAACCGTCAGCGGGCGGAGAGAGTGGAGATGGAACTGAGTTTAGAGAAAAAGTGCACTGAAGAGTTAGACGATGCACTAAAAAGAGCAGTTCTTGGACATGCCAGAATGGTGGAACACTATGCAGACCTGCAAGAAAAATATAACGATTTAGTTGCAAAGCACAATGCTATAATGGAAGGCATAGCAGAGGTGAAGAGAGCAGCGGCCAAGGCTGGAAAGAAGGGTCATGCTCGCTTTGCCAAATCTCTTGCTGCTGAGCTTTCAGCATTGAGGGTGGAGAGAGAAAGGGAAGCAAAATTCTTAAAAAAGGAGAACATGAATCTCAAGATTCAACTTAAAGAAACTGCAGAAGCTGTTCATGCTGCTGGTGAACTACTTGTCAGACTAAGGGAAGCTGAGCATGCAGCTTCTATTGCAGAGGAGAATTCAACAAAGGTGCAACAAGATAATGAAAAGCTAAAAAAGCAAATGGACAAGCTGAAAAGAAAACATAAGATGGAGATGATTACCATGAAGCAGTACCTTGCAGAGAGCAAATTACCAGAGTCCGCACTGCAGCCACTATTTAGAGAGGATTCTGATGTGGTTCAAGACAATGCAACTTCCCGTGAGGATCAGGCATGGAGAGTAGAGTTTGGAGCAATCTATCAACAGCATTATTAA 3648 0.4087 MRQFSNAQTSETRFSGTISSTSLRNFLPRSFSSKHKPTSISKIPNSDAENTPPTDPNILYNHDQSLPSTINQSLSKNSTSQNNLHQSKPPFELDPPVKVVVRIRPTNNNGIEGDRTVKKVSSDTLCVGDRQFTFDSVFDSNTNQEDIFQSVGVPLVKNALDGYNTSILSYGQSGSGKTYTMWGPPSAMFEEPSPQSHKGIVPRIFQMLFSELDREQQASDGKQFNYQCRCSFLEIYNEQIGDLLDPTQRNLEMKDDNKNALYIENLTEEYVTSYDDVTQILIKGLSSRKVGATSLNSKSSRSHIIFTFVIESWCKGISSKGFSSSKSSRISLIDLAGQDRNKIEDAGKQCLKESKNVKKSLSQLGHLVDVLTKETLSGKAEEISNRNSCLTRLLQESLGGNAKLSLICSISPDNKNTGETLRTLRFGQRVRTIRNEPVINEIKEDDVNDLSDQIRQLKEELIRAKAEVRCSDGIKNGYFQGRNVRDSLNQLRVSLNRSILLPCIDKDTDEEVNVDEEDIRQLRQQIDELYHSCEGNPTNISVGEDSVQFYSVAEICDADMTGGDEIEIEEEGCFEDTLCKPCPEESEGSTTVLYTSADDFASTANASRSIKSTFRDSISVSSCGRSPILEEPPLSESPKIKNVQRKSVAYTSSCLGSWNNVAEENFSSSKEGEKMRLSLRSSKVFPGPTESLAASLQRGLQIIDYHQRNSTLNKSSASFSFDHLTLRPCSEIDKDDSGDQVTQQKKYSVDESTATLLCEPCRKRICNQDTTEVQGNVKSRIETEAENPDGLTDKVSEDSQSIMEKAITREKELENVCKEQAAKIEELNQLVEKLKGEKELQSSIIVYDPERNKQTRHEDSNLLNDEDRLPRGTSLDKCLPDIVEEKCEIKEVKEVQEVVTNGDGSFDAAEKEELLKEIQNLRSKLQICSDVTVRKSTDKLRSSLSLMSRSIQQRKSAVFSQDNNGDELEKERQRWTEMESEWICLTDELRVDLESNRQRAERVEMELSLEKKCTEELDDALKRAVLGHARMVEHYADLQEKYNDLVAKHNAIMEGIAEVKRAAAKAGKKGHARFAKSLAAELSALRVEREREAKFLKKENMNLKIQLKETAEAVHAAGELLVRLREAEHAASIAEENSTKVQQDNEKLKKQMDKLKRKHKMEMITMKQYLAESKLPESALQPLFREDSDVVQDNATSREDQAWRVEFGAIYQQHY* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0168 1215 Pfam Kinesin motor domain 113 433 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra6g0168 1215 PANTHER CENTROMERE PROTEIN E 75 1215 - -
Vra6g0168 1215 Coils Coil 512 532 - -
Vra6g0168 1215 MobiDBLite consensus disorder prediction 28 88 - -
Vra6g0168 1215 MobiDBLite consensus disorder prediction 28 93 - -
Vra6g0168 1215 Gene3D Kinesin motor domain 92 473 IPR036961 -
Vra6g0168 1215 ProSiteProfiles Kinesin motor domain profile. 96 433 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra6g0168 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 467 IPR027417 -
Vra6g0168 1215 Coils Coil 1124 1165 - -
Vra6g0168 1215 Coils Coil 911 931 - -
Vra6g0168 1215 PANTHER KINESIN-LIKE PROTEIN KIN-12F 75 1215 - -
Vra6g0168 1215 Coils Coil 810 844 - -
Vra6g0168 1215 Coils Coil 1079 1113 - -
Vra6g0168 1215 Coils Coil 440 467 - -
Vra6g0168 1215 SMART kinesin_4 94 441 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra6g0168 1215 PRINTS Kinesin heavy chain signature 162 183 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra6g0168 1215 PRINTS Kinesin heavy chain signature 293 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra6g0168 1215 PRINTS Kinesin heavy chain signature 329 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra6g0168 1215 PRINTS Kinesin heavy chain signature 383 404 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0168 Vra-Chr6 1228319 1234146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0168 97 461 Miscellaneous Gene Families AT4G39050 36.022 9.22e-53 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0168 K10400 - gmx:100806960 1945.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0168 6 1228319 1234146 Vra6g0168 6 1228319 1234146 ECH
Vra10g0266 10 7015075 7021105 Vra6g0168 6 1228319 1234146 PCT