Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0266 ATGAGGCAAAAGACCAACAACACAGATTCTAGTGGGTTTTTGGGAACCATTTCTTCTAATTTTCTCAGATCAATCTCTTCTTCCAACCGCAAACCCACTTCTTCTTCCTTTACAAACCATAAATTCCTGAATTCCGACGTTGAAAACACTCCCCCTACCCATCCAAACATTTCCCTCAATCACCATCAACAATTGAAGCCCCACGACCCATTTTCCCACAGCAACTCACATGTGAAGGTTGTGGTGAGAATTAAGCCTGAAAATATCAATGGAAAAGAGGGGGATTGGGAAATTAAGAAGGTTTCTTCTGATGCCCTGTGTATTGGAGACATAAAGTTCATGTTTGATGAAGTTTTTGATGCCAACTCCAATCAGGAAGATGTTTTTCAGTCAGTGGGTGTTCCCTTGGTTAGAAATGCCTTAGCTGGTTACAACACTACTATTCTGTCATTTGGTCAGTCTGGGAGTGGAAAGACTTACACAATGTGGGGTCCCCCAAGTGCCATGGTTGATGAGTCCTCGTGTTCTAGTCAATTGGGAATTGTTCCTCGGATCTTCAGAATGTTACTTTCTGAGCTAGAGAGAGAGAAGCTTATTTCTGGTGAGAAGCAGTTCAATTATCAATGTCGTTGTTCATTTCTTGAGATATACAACGAACAAATTGGCAATTTACTCAATCCTATTCAGCAGAACCTTGAGATGAAGGATGATTCAAGAAATGCTCCTCATATTGAAAATCTGATCGAGGAATACGTCACTAACTATGATGATGTGGCAGAAATTTTGATTAAGGGCCTTTCAAGGAGGAAAAAGGGAGCAACGAATTTAAATTCTAATAGCTCTGGATCACACATAATTTTCACATTTGTTATTGAATCTTTTTGCAAGGGAACCACAGAGGGCTTATTCAGTAGCTCAAAAGTTAGCAGAATCAGCCTTATTGATCTTGCTGGACTGGACAGCGACGAAGTTGGTGATTTAGGTAGCCAATGTACAAGGGAAAACAAACATGTCCAGAAATCATTATCTCAGCTCGAGCATTTAGTGGATGCTCTGAGTAAGAAATCTCAGTCTGGAAAAAACGGAGACATTCCACACAACGACTCCTGCTTAACTCGATTACTACAAGGATCACTTGGTGGAAATGCCAAACTCTCAGTAATATGTTCCATCTCCCCTAATAAAAAGAGTAATGATAAAACCCTGCGCACACTCAGATTTGGTGAGCAAGCAAGATCCATCACAAATGAGCCAGTTATCAATGTAATAAAGGAGGCTGATGTTGATTTGAGTAATAATATCAGACACTTAAAGGAAGAACTTGTTAGAGCAAAGTACGATGTTTACAGCTCAGCTGGGAGTAAAGAAGGATACTTCCAAGGACCAAATGCACGGGAAAGCCTGAATCAGATGAGAGTCAGCTTAAACCGCTCTCTACTCCTATCCAACGTAGGTCGTGATACTAGTGAGCGCGTAAATGTCAGCAAGGATGACATACAGCAATTACGCCAGCAAATTGATGAATTGGATAGCTCATCTGAAGGAAATCCAAAGGATATGTATGTCAATGAAAATCGTGTCCAGTTTTATTCTGTTGAGGAAAATTGTGATGCAGACACCAACAGCGTTGATGAAATTGAAAAGGATGAGGTATGCTGCGGAAAAACACTGAGCATTTCAGTCAATTCATGTAATCAATTTCCAGTACTTGCTGGACCACAGTTGTCCGAATCTCCAAAGTTCAGCAAAACTCAAAGGAAAAGTTTGGCTATTTCTTCAAGCTATCTTGGAAGTTGGAACAATGTGACAGAGAGTTCAACTTTCAGCAACAATGTGTTAGACAAACCTTTTAAACAGGGCGAGCACGTGCAATCCTCAGTACAGTCTAGCAAGGTTGAGTCCTTGGCAGCAAGCCTTCAGAAGGGACTACAGATTATTGACTATCATCAGCATAATTCAGCATTGAACAAATCTTCATCGTCCTTCTCCTTTGAGCACTTAACTTTGACACCTTCTCTAGACATTGACAAGGCTGAATCTTGTGATCAAACAATACCACAGAAAGCTTCCAGTGATGAAGTAGCTTCTTTCCTTTGTGAATCTTGCCGGACCAAAATATCTAGTCAGGATTCCAGTTTGGTCCAACTGGCATTTGGAGAATGTAACGGCAAAAACATCATGAAAGAGAAGGAGCTCGAGAATGTTTGTAAGGAGCAAGCAGCTAGAATTGAGCAACTAAATCAGCTGGTGGAGAAATTGAAAGGAGATAGAGAACTGAACTCGATGAAAGATGAAGAAAAGCTTCTAAGGGAATTTTCCTCAAATGGTCATTTGCCATGCATTATAGAGGAAAAATGTGAAATTAAAGAAGTTCAGGAAGAGTTAGCCCAAAAGGACGTCTCTTTTGATTCAACTGAGAAGGAATCACTTCTTAAGGAAATTCAGAATCTAAGGAGCAAGCTGCAATTATGCAGCGATGCACCAGTAAAAAAATCTACTGACAAACTAAGGTCTTCATTGATGTCAAGATCCATACAACTGCAAAAGAGCGGGGTATTTTCTTATGATAATGGCAACGAAGAGCTAGAGAATGAAAGACAGAGATGGACAGAAATGGAAAGTGAGTGGATTTGTCTTACTGATGAACTTAGAGCTGATCTTGAGTCATATCGCCAACGTACTGAGAGGTTGGAGATGGAACTGACGTCAGAGAAGAAGTGCACAGCAGAGATAGATGATGCGCTAAAGAGAGCAGTTATGGGACATGCTAGAATGGTGGAACACTATGCTGATCTACAAGAAAAATACGATGATTTGGTTATGAAACACGACGCCATAATGGAAGGGATAGCAGAAGTGAAGAAGGCAGCAGCGAAAGCCTCGAAAAAAGGTCACGCCCGCTTTGCCAAGTCTCTTTCCGCTGAGCTTTCAGCATTGAGAGTGGAAAGAGAAAGGGAATCAAAATTATTGAAAAAGGAGAATCAGAACTTGAAGACTCAGCTTCGAGATACTGCTGAAGCTGTTCAGGCTGCTGGAGAGCTACTTGTTCGGCTAAGAGAAGCTGAACATGCAGCAGCTTTTGCAGAGGAGAACTTTGCAAATGTGCAACAAGACAATGAAAATTTGAAGATGCAAATTGAAAAGCTGAAAAGAAAACACAAGACAGAGATTAATACCATGAAGCAGTACATTACAGAGAGCAAATTACCTGAGTCTGCACTGCAACCACTGTATAAAGAGGATTGTGATGTGGCACACAATACAGCCTCCTCCTATACATACGATGATCAGGCTTGGAGAGCAGAATTTGGAGCAATATATCAGGATCATTATTAA 3336 0.408 MRQKTNNTDSSGFLGTISSNFLRSISSSNRKPTSSSFTNHKFLNSDVENTPPTHPNISLNHHQQLKPHDPFSHSNSHVKVVVRIKPENINGKEGDWEIKKVSSDALCIGDIKFMFDEVFDANSNQEDVFQSVGVPLVRNALAGYNTTILSFGQSGSGKTYTMWGPPSAMVDESSCSSQLGIVPRIFRMLLSELEREKLISGEKQFNYQCRCSFLEIYNEQIGNLLNPIQQNLEMKDDSRNAPHIENLIEEYVTNYDDVAEILIKGLSRRKKGATNLNSNSSGSHIIFTFVIESFCKGTTEGLFSSSKVSRISLIDLAGLDSDEVGDLGSQCTRENKHVQKSLSQLEHLVDALSKKSQSGKNGDIPHNDSCLTRLLQGSLGGNAKLSVICSISPNKKSNDKTLRTLRFGEQARSITNEPVINVIKEADVDLSNNIRHLKEELVRAKYDVYSSAGSKEGYFQGPNARESLNQMRVSLNRSLLLSNVGRDTSERVNVSKDDIQQLRQQIDELDSSSEGNPKDMYVNENRVQFYSVEENCDADTNSVDEIEKDEVCCGKTLSISVNSCNQFPVLAGPQLSESPKFSKTQRKSLAISSSYLGSWNNVTESSTFSNNVLDKPFKQGEHVQSSVQSSKVESLAASLQKGLQIIDYHQHNSALNKSSSSFSFEHLTLTPSLDIDKAESCDQTIPQKASSDEVASFLCESCRTKISSQDSSLVQLAFGECNGKNIMKEKELENVCKEQAARIEQLNQLVEKLKGDRELNSMKDEEKLLREFSSNGHLPCIIEEKCEIKEVQEELAQKDVSFDSTEKESLLKEIQNLRSKLQLCSDAPVKKSTDKLRSSLMSRSIQLQKSGVFSYDNGNEELENERQRWTEMESEWICLTDELRADLESYRQRTERLEMELTSEKKCTAEIDDALKRAVMGHARMVEHYADLQEKYDDLVMKHDAIMEGIAEVKKAAAKASKKGHARFAKSLSAELSALRVERERESKLLKKENQNLKTQLRDTAEAVQAAGELLVRLREAEHAAAFAEENFANVQQDNENLKMQIEKLKRKHKTEINTMKQYITESKLPESALQPLYKEDCDVAHNTASSYTYDDQAWRAEFGAIYQDHY* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0266 1111 Coils Coil 1011 1066 - -
Vra10g0266 1111 Coils Coil 976 1007 - -
Vra10g0266 1111 Coils Coil 788 827 - -
Vra10g0266 1111 PRINTS Kinesin heavy chain signature 143 164 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra10g0266 1111 PRINTS Kinesin heavy chain signature 274 291 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra10g0266 1111 PRINTS Kinesin heavy chain signature 310 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra10g0266 1111 PRINTS Kinesin heavy chain signature 364 385 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra10g0266 1111 PANTHER KINESIN-RELATED 47 1093 IPR027640 GO:0003777|GO:0007018
Vra10g0266 1111 Coils Coil 335 355 - -
Vra10g0266 1111 Pfam Kinesin motor domain 102 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra10g0266 1111 PANTHER KINESIN MOTOR DOMAIN PROTEIN 47 1093 - -
Vra10g0266 1111 Coils Coil 492 512 - -
Vra10g0266 1111 Gene3D Kinesin motor domain 73 451 IPR036961 -
Vra10g0266 1111 Coils Coil 855 875 - -
Vra10g0266 1111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 445 IPR027417 -
Vra10g0266 1111 Coils Coil 880 900 - -
Vra10g0266 1111 MobiDBLite consensus disorder prediction 27 73 - -
Vra10g0266 1111 SMART kinesin_4 75 422 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra10g0266 1111 Coils Coil 729 756 - -
Vra10g0266 1111 ProSiteProfiles Kinesin motor domain profile. 77 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra10g0266 1111 MobiDBLite consensus disorder prediction 27 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0266 Vra-Chr10 7015075 7021105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0266 69 414 Miscellaneous Gene Families AT4G39050 33.616 1.65e-44 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0266 K10400 - gmx:100817066 1726.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0266 10 7015075 7021105 Vra6g0168 6 1228319 1234146 PCT