Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0126 ATACAATCAACAGATGTTTCAAAAAGTCGGGCAAAACAGCTTAAAGAAGAAAAGTGTGGTGATCTTGATGGAACCAATGGTTCTTGGAAAGAAGAGTTAGAAACTGCAGTTAAAAGTTATGCCTCTGTCGTTACAGAACTTGATGTTGCAAAGCAAGAACTGAGTAAAATTCGGCAGGGGTATGATTTATCCTTAGAAGCAAGAGTTTCTGCTTTCAAACAAGCAGCAGAAGCGGAAGATGCAATGAAGGCCAACAACAAAAGAGCATCCGAACTATCTAAAGAAATTTTGGCTGTAATGGAATCAATCGATCAAGTTAATGCTCAATCTGTCCAAGCACATTTGCTGCAAGAAGAGACACAAGCCAAGCAAAATGTTCTAAGACAATCATATGAGGCTGCCCTTGAAGAATCCAAAAGGAATTTGCTTGATTTAAAGAAGGAATTTAATCCAGGGCTTACCAAAAATCTAGAGTTGCAGCTGACTGAGACAATGAATGAGATAAGCGTTCAGCAAGAACAATTGGAAAATAGAAAGAAATCAGACTTGGATTCTTTGAAGAGTGTCACTCTGGATCTTGATGATGCTAAGGAATCACTGCAGAAAGTAGCAGGACAGGAAGAGTCCCTTAGAGCCATGGTGGAAGCTCTAAGGATGAATCTGGAGAATGTAAAAGGAGAACACACTGCATTGAAAGAGAAAGAATTCAAAACTGTTTCCTTTATTGAGAATCTGCGGGTAGAGCTCCAGAAAAGTGAGTCTGAACTTGAGTCCCACTTGGCAGAAGAATCTAAAGCTAGAGGTGCATCAGAAGAAATGATCTGGAAATTGAACCAGTTGTTGACAGAAACTGAAAATGCAAGGAGGGAAACACAAGATAGGAAGAATGAGGCTGCACAATTGAAGATGGAAGCTGTAGTCACTAAACTTGTTTTAGAAGATGCCGAAATAAAGCTCAAAGCAGCATTGAAAGAAGTAGAAGTAGCAAAAACAGCTGAGGCAAGTGCTCTTGAACAGATCAGGATCTTATCTGTGAGGACCAGTGATTCTGGTTCATCAACTTGTGAATCTGGTGCAAGAATTACAATCTCAAGGGAGGAGTTTCAGTCCTTAGTTCATAAGGTTGAGGAGTCTGATAAATTAGCAGATATGAAAGTGGATGCTGCCAAAGCACAGATGGAAGCTACAAAGGTGAGTGAAAATGAAGTTCTAAAAAGGTTAGAGGAAACTAAAAAGGAAATTGAGGATATGAAGACTGAAACACAGGAAGTCTTGAAAAGGGCTGAGATGGCTGAAGCAGCAAAGAGAGCAGTGGAGAATGAGCTGAGAAAGTGGCGTGAAAGAGAGCAGAAGAAAGTAGCAGAAGCTGCTTCTAAATTATTGGCTGAAACACAGATGGCAACAGAATTATCTCCTCAGCACTATAGGATTCAAAAGCAGAATTCACTACCAAAGGTGGAGATGAAGAAGTTAGAGAAAGGGAAGGTTTCAGTTTCAAAGAAAGTTCTCTTGCCTAACATGAGTGCCATCTTTCACAGGAAAAATAACCATGTTCAAGGAGGACCTTCTTCTTAG 1575 0.4006 IQSTDVSKSRAKQLKEEKCGDLDGTNGSWKEELETAVKSYASVVTELDVAKQELSKIRQGYDLSLEARVSAFKQAAEAEDAMKANNKRASELSKEILAVMESIDQVNAQSVQAHLLQEETQAKQNVLRQSYEAALEESKRNLLDLKKEFNPGLTKNLELQLTETMNEISVQQEQLENRKKSDLDSLKSVTLDLDDAKESLQKVAGQEESLRAMVEALRMNLENVKGEHTALKEKEFKTVSFIENLRVELQKSESELESHLAEESKARGASEEMIWKLNQLLTETENARRETQDRKNEAAQLKMEAVVTKLVLEDAEIKLKAALKEVEVAKTAEASALEQIRILSVRTSDSGSSTCESGARITISREEFQSLVHKVEESDKLADMKVDAAKAQMEATKVSENEVLKRLEETKKEIEDMKTETQEVLKRAEMAEAAKRAVENELRKWREREQKKVAEAASKLLAETQMATELSPQHYRIQKQNSLPKVEMKKLEKGKVSVSKKVLLPNMSAIFHRKNNHVQGGPSS* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0126 524 Coils Coil 242 262 - -
Vra6g0126 524 Coils Coil 277 304 - -
Vra6g0126 524 Coils Coil 154 174 - -
Vra6g0126 524 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 1 508 - -
Vra6g0126 524 Coils Coil 390 455 - -
Vra6g0126 524 Coils Coil 75 95 - -
Vra6g0126 524 MobiDBLite consensus disorder prediction 9 27 - -
Vra6g0126 524 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 1 508 - -
Vra6g0126 524 Pfam Weak chloroplast movement under blue light 20 451 IPR008545 -
Vra6g0126 524 Coils Coil 128 148 - -
Vra6g0126 524 Coils Coil 207 234 - -
Vra6g0126 524 MobiDBLite consensus disorder prediction 1 27 - -
Vra6g0126 524 Coils Coil 312 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0126 Vra-Chr6 899073 902532 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0126 - - gmx:100817643 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0126 6 899073 902532 Vra6g0126 6 899073 902532 ECH
Vra10g0299 10 7552098 7557897 Vra6g0126 6 899073 902532 PCT