Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0299 ATGGTAGCGAAAATTCGTCAAAGTGCTACTGAGTCTCCTAATCCAAAACCGGAGGTTGGAGAGATTGACACCAGCCCACCTTTTCAGTCTGTTAAAGATGCTGTCTCTCTATTTGGTGAAGGTGCTTTCTCTGGTGAAAAACCAATTATTAAGAAGGCAAAACCTTATTCTGCTGAGAGAGTACTGGCCAAGGAGACACAACTTCATGTAGCCCAAAAAGAGCTGAACAAGTTAAGGGAACAAGTAAAGAATGCTGAAACTACCAAGGTTCAAGCTCTTGCGGAGCTTGAAAGGGCGAAAAGAACAGTTGAGGATCTGACACAGAAGATGAAAGTTATTGGTGATTCTAGGGAGTTAGCGATCAAGACAACCGAAGCTGCAAAGAGTCAGGCAAAACAACTTGCAGAAGAAAAGTATGGTATCCCTGACGTAACAGGTGGTGCTTGGAAGGAAGAATTAGATTCTGCAGTAAAAAGGTATGCATCTGTCATGACAGAACTTGATGCAGCAAAGCAAGTGTTGAGCAAGACTCGACAAGAGTATGATTCATCCTTGGATGCAAAAAAGTCTGCTTTCAAGCGAGCAGCAGAAGCTGAAGATGGATTGAAGGAAAACACAGAAAGAGCATCTGAGCTTTCTAAAGAAATTTCATCTGTAAAGGAGTCAATTGAGCAAGCAAAGCTTGCATCTGTTGTGGCACAGCAACAGCAAGCAATGATTTTGGCTGAGAAAGATGTTCTAAGACAATCGTATAAAGCTACCCTGGAACAATCTGAAAAGCAATTGCTTGCATTAAAGAAGGAATTCAGTCCTGAGCTTTCCAAGAATCTTGAAATGCAGCTTGAGGAGAGAATGAGTGAAATTGGGGCTCTTCAAAAGGAAATGGAAAATAAAAGGACGTCGGACTTGGACTCTGTTAAAAGTGTCACTTTGGAGCTTGACGATGCTAAGGAGTCACTGCAGAAAGTAGCAGATGAAGAAAGCTCTCTTAAAAGCTTAGTGGAATCTCTCAAGGTGGAACTGGAGAATGTAAAGAAAGAACATTCTGAGTTGAAGGAGAAGGAATCTGAAACTGAATCCATTGTTGGGAATCTGCACGTCAAGCTCCGCAAAAGCAAGTCCGAGCTTGAAGCCTGCATGTCAGAAGAATCTAAGGTTAGAGGTGTATCTGAGGAAATGATCTTGACACTTAGCCAGCTGACATCTGAAACTGAAAATGCAAGGCTGGAAGCAGAAGATATGAAGAAAAAAACAGAAGAATTGAAGAAGGAAGCTGAAGTTACTGGACTTGCATTAGCAGAAGCAGAGAGAAAGCTTAAAATGGCACTGGAAGAAGCAGAAGCAGCAAAAGCAGCCGAGAAAAGAGCTCTTGACCAGATTACAGTGTTAACTGAAAGAACTACTGCTGCTCGTGCATCCACATCTGAATCTGATGCTGTGATTACAATCTCAAAAGATGAGTTTGATTCACTAAGCCATAAAGTTGAGGAGTCTGACAAATTAGCAGACATGAAAGTGGCTGCTGCCAAGGCACAGGTTGAAGCTGTGAAGGCTAGTGAAAATGAGGCTCTCAAAAAGTTAGAGACAACTCAGAAGGAAATTGAGGATATAAAGGCTGCAACACAAGAGGCCCTGAAAAAGGCTGAAATGGCTGAAGCAGCAAAAAGGGCAGTGGAGAGTGAGCTCCGAAGATGGCGTGAGAGGGAGCAGAAGAAGGCTGCAGAAGCTGCATCCCGAATTTTGGCTGAGACACAGGTGTCAACAGAATCATCACCTCAGCACTACAGGATTCAAAAGCAGAATCATCCTCATACAACTGCAGAGGTGAGGAAGTTTGAAAAGGAGAAGGTTTCAGTTTCAAAAAAAGCCCTCTTGCCTAATATTAGCGGCATCTTCCATAGGAAGAAAAACCAGGTTGAGGGTGGCTCTCCTTCTTATCTGCCTGGTGAGAACCCTCTATGA 1962 0.4302 MVAKIRQSATESPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPIIKKAKPYSAERVLAKETQLHVAQKELNKLREQVKNAETTKVQALAELERAKRTVEDLTQKMKVIGDSRELAIKTTEAAKSQAKQLAEEKYGIPDVTGGAWKEELDSAVKRYASVMTELDAAKQVLSKTRQEYDSSLDAKKSAFKRAAEAEDGLKENTERASELSKEISSVKESIEQAKLASVVAQQQQAMILAEKDVLRQSYKATLEQSEKQLLALKKEFSPELSKNLEMQLEERMSEIGALQKEMENKRTSDLDSVKSVTLELDDAKESLQKVADEESSLKSLVESLKVELENVKKEHSELKEKESETESIVGNLHVKLRKSKSELEACMSEESKVRGVSEEMILTLSQLTSETENARLEAEDMKKKTEELKKEAEVTGLALAEAERKLKMALEEAEAAKAAEKRALDQITVLTERTTAARASTSESDAVITISKDEFDSLSHKVEESDKLADMKVAAAKAQVEAVKASENEALKKLETTQKEIEDIKAATQEALKKAEMAEAAKRAVESELRRWREREQKKAAEAASRILAETQVSTESSPQHYRIQKQNHPHTTAEVRKFEKEKVSVSKKALLPNISGIFHRKKNQVEGGSPSYLPGENPL* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0299 653 Coils Coil 274 294 - -
Vra10g0299 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 3 630 - -
Vra10g0299 653 Coils Coil 397 463 - -
Vra10g0299 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 630 - -
Vra10g0299 653 Coils Coil 61 116 - -
Vra10g0299 653 MobiDBLite consensus disorder prediction 583 606 - -
Vra10g0299 653 Coils Coil 510 568 - -
Vra10g0299 653 MobiDBLite consensus disorder prediction 1 28 - -
Vra10g0299 653 Pfam Weak chloroplast movement under blue light 21 571 IPR008545 -
Vra10g0299 653 Coils Coil 248 268 - -
Vra10g0299 653 Coils Coil 306 361 - -
Vra10g0299 653 MobiDBLite consensus disorder prediction 583 600 - -
Vra10g0299 653 Coils Coil 195 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0299 Vra-Chr10 7552098 7557897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0299 - - gmx:100794569 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0299 10 7552098 7557897 Vra6g0126 6 899073 902532 PCT