Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2747 ATGACTTGGAAAAGCAGGGGAGACTTGCTTCCCAAAAGTGTTATGTCTAAGAAATGGGTGATTTTTCTCTGTATTGGAAGCTTCTGTGCTGGGATGGTCTTCACCAACAGGATGTGGACTATGCCTGAACCTAAAGGACTTGGACGAACAACAGCCATGGAAGCTGAAAAATTGAATGTAGTTTCAGAGGGTTGTAATACAAGAATTTTGCAAGAGAAGGAAGTGAAGCGTGAAAGTAAAGGAATCTATAGAGAGGTTTCCAAGACACAAAATGCCATACAAACCCTTGATAAGACTATTTCAAACTTGGAGATGGAATTAGCAGCTGCAAAGGCAGCTCAGGAGTCTATACGAAGTGGTGCTCCAGTACCAGCAAATATCAAGATGAGTGAATCATCTGGCAGAAGAAGGTACCTAATGGTCGTAGGAATCAACACTGCTTTCAGCAGCAGAAAAAGAAGAGACTCAGTTCGTGAGACATGGATGCCACAAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAGAAGGGCATTATCATCCGATTTGTAATTGGTCATAGTGCCACATCAGGGGGTATCCTAGACAGAGCAATTGAAGCAGAAGATAAGAAGCATGGAGATTTTCTGAGACTGGATCATGTTGAGGGATACCTTGAATTGTCAGCAAAGACAAGGACCTACTTTGCCACTGCTGTTAACTTATGGGATGCTGACTTCTATATCAAAGTTGATGACGATGTTCACGTAAATATAGCGACACTAGGACAAACTCTAGTGAGACACCGATCAAAACCACGGGTGTACATTGGATGCATGAAATCTGGGCCTGTTCTTTCTCAAAAAGGGGTAAGGTACCACGAGCCAGAATACTGGAAATTTGGTGAGGCTGGAAACAAGTATTTCCGTCATGCCACGGGACAGTTGTATGCCATTTCAAAAGATCTGGCTACATACATTTCAAACAACAAGCACGTTCTCCACAAGTATGCCAATGAGGATGTCTCACTAGGTGCTTGGTTTATTGGACTTGATGTGGACCACATAGATGATCGAAGACTCTGCTGTGGTACACCACCAGATTGTGAATGGAAAGCACAGGCAGGAAATGTTTGTGTTGCTTCATTTGATTGGAGTTGCAGTGGAATTTGCAGGTCTGCTGAAAGGATCAAAGAGGTTCACAAGAGATGTGGGGAAGGTGAAAAAGCTTTGTGGAGTGGCTCTTTCTAG 1224 0.4322 MTWKSRGDLLPKSVMSKKWVIFLCIGSFCAGMVFTNRMWTMPEPKGLGRTTAMEAEKLNVVSEGCNTRILQEKEVKRESKGIYREVSKTQNAIQTLDKTISNLEMELAAAKAAQESIRSGAPVPANIKMSESSGRRRYLMVVGINTAFSSRKRRDSVRETWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDKKHGDFLRLDHVEGYLELSAKTRTYFATAVNLWDADFYIKVDDDVHVNIATLGQTLVRHRSKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISKDLATYISNNKHVLHKYANEDVSLGAWFIGLDVDHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSAERIKEVHKRCGEGEKALWSGSF* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2747 407 Gene3D - 136 351 - -
Vra5g2747 407 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 399 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra5g2747 407 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Vra5g2747 407 Pfam Galactosyltransferase 152 349 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra5g2747 407 Coils Coil 86 113 - -
Vra5g2747 407 PANTHER HEXOSYLTRANSFERASE 8 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2747 Vra-Chr5 34549314 34553157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2747 1 407 Glycosyltransferase AT1G05170 76.904 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2747 K20855 - gmx:100793931 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2747 5 34549314 34553157 Vra5g2747 5 34549314 34553157 ECH
Vra5g2747 5 34549314 34553157 Vra2g0948 2 9586694 9591228 PCT