Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2455 ATGGAGGTTGCTACAGAGCAACAGATGAATCCAGAAGTAGAAAGGCGAAAGGGTGGCTTCATTACCATGCCTTTCATTATAGCAAATGAAGGCTTAGCGAAGGTGGCGAGCGTTGGACTTATTCCAAACATGATAGTATATTTGATGGGAGATTACAGAATGGGAGCAGTGAAAGCAACAAAGATTTTGTATTTCTGGTTTGCTGCTACCAATTTTGCTCCTGTTCTTGCTGCATTTCTTGCTGATGCATATTTCGGTCGTTTCCTTTCCATTGCTTTAGGTTCAATTCTCAGTTTCCTGGGAATGACGGTGATGTGGCTAACTGCGATGATCCCAGAGGCAAGGCCATGCAGCTATTCAACTGAGAACTGCAAATCTGCAACAACACTCCAAATGGCTATCTTACTCTCTTGCTTTGCTCTCATATCCATTGGAGGTGGTGGAATCTCATGTTCCTTAGCATTTGGTGCGGATCAGCTTAACCAAAAAACCAAACCCAACAATCAGAGGGTCTTAGAGAGCTTCATAAGTTGGTACATAGCTTCTCAAACCATTGCTGTCGTTCTTGCATTGACGGGAATAGTTTACATCCAAGACCATTTTGGCTGGAAACTGGGCTTTGGGGTCCCAGCAGCACTTATGCTCTTCTCCACTTTCTCCTTCTTCCTCATTTCCCCACGTTATGTCAAGCATAAACCAAACAACAGCTTGATCACTGGCTTTGCCCAAGTGATTTTCGTTGCCTACAAGAACAGAAACCTTTCATTTCCACCTAAGAACTCCACTGCCGATGGCGTCTATCACCATCACAAGGACTCCACCCTTATCGCTCCAACTGATAAACTAAGGTTTCTAAACAAAGCTTGCATCATCAGAGACAGAGAACGGGATATAGCCTCTGATGGGTCGGCTTCAAAAAAATGGAGTCTTTGCACAGTAGAGCAAGTGGAAGAACTGAAGGCAATCATTAAGGTTATTCCCATTTGGTCGACCGGTATCATGGTGGCAGTTAGCACAAGCCAGACATCACTTTGGTTGCTCCAAGCTAAAACCATGAACAGACATGTCACTTCAAACTTCCAAATTCCAGCAGGCTCTTTCGGTGTGTTCATGATGGTTGCAGTGTGCATAACTGCGGGTGTCTATGATCGTGTCATCCTTCCTCTAGCTTCAAAAGTTAGAGGAAAACCAGTAACCATCAGTGCCAAAAAAAGAATAGGAATTGGACTGTTTTTCTCCTTTTTGGACTTTGTGACTTCGGCAATTGTTGAGAGTATAAGGAGGAGGAAAGCAATACGAGAGGGGTTTGCTGATAATCCTGAGGCGGTGTTGGAGATGTCTGCAATGTGGCTTATCCCACATAATATTCTGTGTGGTATAGCAGAAGCCTTTAATGCAATAGGGCAATCAGAGTTCTATTACTCAGAGTTTCCAAGTAGCATGTCAAGCATTGCTGCATCTCTGTTCAGCCTAGGATCTGCTGTGGGAAACTTGGTGGCTTCTCTTATACTCAGCACTGTGGATAACATTACTTCCAAAGGTGGAAAACAGGGTTGGGTTTCAGATAACATTAACAAGGGTCATTATGACAAGTATTATTGGCTTCTTTCCATACTGAGTGCTGTTAATATTCTCTACTATTTGGTTTGCAGTTGGGCTTATGGCCCTAGTGCTGAAGCAGTCTCAAAGAAGGAAGAAAGAGGGAACAGAGTTCGTGATCAACAACAAGAAGCAATGGAATGA 1743 0.4355 MEVATEQQMNPEVERRKGGFITMPFIIANEGLAKVASVGLIPNMIVYLMGDYRMGAVKATKILYFWFAATNFAPVLAAFLADAYFGRFLSIALGSILSFLGMTVMWLTAMIPEARPCSYSTENCKSATTLQMAILLSCFALISIGGGGISCSLAFGADQLNQKTKPNNQRVLESFISWYIASQTIAVVLALTGIVYIQDHFGWKLGFGVPAALMLFSTFSFFLISPRYVKHKPNNSLITGFAQVIFVAYKNRNLSFPPKNSTADGVYHHHKDSTLIAPTDKLRFLNKACIIRDRERDIASDGSASKKWSLCTVEQVEELKAIIKVIPIWSTGIMVAVSTSQTSLWLLQAKTMNRHVTSNFQIPAGSFGVFMMVAVCITAGVYDRVILPLASKVRGKPVTISAKKRIGIGLFFSFLDFVTSAIVESIRRRKAIREGFADNPEAVLEMSAMWLIPHNILCGIAEAFNAIGQSEFYYSEFPSSMSSIAASLFSLGSAVGNLVASLILSTVDNITSKGGKQGWVSDNINKGHYDKYYWLLSILSAVNILYYLVCSWAYGPSAEAVSKKEERGNRVRDQQQEAME* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2455 580 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT 10 564 - -
Vra5g2455 580 SUPERFAMILY MFS general substrate transporter 37 552 IPR036259 -
Vra5g2455 580 Gene3D MFS general substrate transporter like domains 1 562 IPR036259 -
Vra5g2455 580 Pfam POT family 90 520 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra5g2455 580 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 564 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra5g2455 580 MobiDBLite consensus disorder prediction 561 580 - -
Vra5g2455 580 CDD MFS_NPF1_2 23 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2455 Vra-Chr5 31573065 31576534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2455 2 576 Organic Solute Cotransporters AT1G52190 56.089 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2455 - K14638 gmx:100782867 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2455 5 31573065 31576534 Vra9g0159 9 1071564 1074686 PCT