Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1895 ATGAGTGGGGCTGTTCTTGTTGCTGTTGCTGCTGCCATCGGTAACTTACTGCAAGGATGGGATAATGCGACAATTGCAGGATCTATCTTGTATATAAAAAGGGAATTTCTATTAGAAAGTCAACCCACAGTTGAAGGTCTAATTGTGGCCATGTCACTTATTGGTGCCACCGTGGTTACTACATGCTCTGGTGCCCTTTCAGACTTGCTAGGCCGCCGTCCTATGTTGATTATTTCCTCTCTCCTTTATTTTGTTAGTTCTCTTGTGATGTTATGGTCTCCAAATGTTTATATCCTCCTCTTTGCAAGGCTTTTAGATGGTTTGGGCATTGGTTTGGCAGTTACCTTGGTACCTCTTTACATATCTGAGACAGCTCCTCCTGAGATTAGGGGATTACTCAATACACTTCCACAGTTTACTGGTTCAGCGGGAATGTTTTTATCCTATTGTATGGTGTTTGGGATGTCACTGACCAAGGCGCCAAGCTGGAGACTCATGTTGGGAGTTCTTTCAATCCCTTCTGTTGTTTACTTCGCGCTCACACTGTTCTTCTTGCCCGAGTCTCCGAGATGGCTTGTTAGTAAAGGCCGAATGCTTGAGGCCAAGAAGGTTTTGCAGCGCCTTCGTGGAAGGGAAGATGTTTCCGGTGAAATGGCTTTACTGGTTGAGGGGCTTGGAGTTGGAGGTGATACAGCCATAGAAGAGTATATAATTGCGCCAGTCAATGAACTTGGTGATGAAGAGGACCCATACAGAGAAAAAGATCAGATTAAGTTGTATGGACCGGAACAAGGTCAGTCCTGGGTTGCTAGACCTGCACCTGGACAAAGTTCAATCGGCCTTGTATCTCGGAAGGGAAGCGTGGCAAATCAAAGTGGTCTAGTGGACCCTCTAGTGACCCTCTTTGGTAGTGTTCATGAGAAGCACACGGAAACAGGAAGCATGCGAAGCACTCTTTTTCCACACTTTGGGAGTATGTTTAGTGTTGGGGGAAATCAACCTAGGAATGAAGATTGGGATGAAGAAAGCCTTGCTAGAGAGGGAGATGATTATGTCTCTGATGCTGCTGTGGGTGATTCTGATGACAATTTGCAGAGTCCATTGATCTCACGTCAAACAACGAGTCTGGATAAGGACATACCTCCAACTGCTCATAGCAACCTTTCAAGCACGAGGCAAGGTAGTCTTTTGCATGGAAATGCAGGAGAACCCACTGGTAGTACCAGGATTGGTAGTGGTTGGCAGCTAGCATGGAAATGGACTGAAAGAGAGGACCCAAATGGAAACAAGGAGGGTGGTTTCAAGAGAATATATTTACACCAAGAAGGTGGTCCTGGATTACGTGGTTCTGTGGTTTCTCTCCCTGGTGGTGATATACCGAATGAAGGTGAGACTGTACAGGCTGCTGCTTTGGTGAGTCAGCCAGCCCTTTATAACAAGGACGTTATGCGTCAGCAACCAGTTGGACCAGCCATGATTCATCCATCTGAAACAACTGCAAAAGGGCCAAACTGGAGTGACCTTTCTGAACCTGGAGTGAAGCATGCCTTGTTTGTGGGGGTGGGACTTCAAATTCTTCAGCAGTTCTCTGGTATAAATGGGGTTCTCTACTATACACCACAAATTCTTGAGCAGGCAGGCGTTGGTTATCTTCTTTCAAACCTTGGCCTTGGTTCTACTTCTTCATCCTTTCTCATTAGTGCAGTGACAACCTTGTTGATGCTTCCTTGTATAGCCGTTGCCATGAGACTCATGGATATATCTGGCAGAAGGACTTTGCTGCTTAGTACAATTCCCGTCCTAATAGCATCTCTTATCATATTAGTCCTGGGGAGTTTTGTGGATTTGGGCAGCACTGCAAATGCATCAATCTCAACCATTAGTGTTATTGTATATTTCTGTTTCTTTGTCATGGGATTTGGGCCAATTCCTAATATACTTTGTGCAGAGATCTTCCCCACTCGAGTTCGTGGTCTCTGCATTGCCATTTGTGCTCTTACCTTTTGGATCTGTGATATCATTGTCACCTACACACTCCCAGTTATGCTCAATTCCGTAGGCCTCTCTGGTGTATTTGGTATTTATGCTTTCGTGTGCTTCATAGCATGGGTATTTGTCTTTTTGAAAGTTCCAGAAACCAAGGGCATGCCACTGGAAGTCATCATTGAGTTCTTCTCTGTCGGAGCAAAACAAGTTGAGGATGCCAAAGTACAACTGACCTAA 2223 0.4521 MSGAVLVAVAAAIGNLLQGWDNATIAGSILYIKREFLLESQPTVEGLIVAMSLIGATVVTTCSGALSDLLGRRPMLIISSLLYFVSSLVMLWSPNVYILLFARLLDGLGIGLAVTLVPLYISETAPPEIRGLLNTLPQFTGSAGMFLSYCMVFGMSLTKAPSWRLMLGVLSIPSVVYFALTLFFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLGVGGDTAIEEYIIAPVNELGDEEDPYREKDQIKLYGPEQGQSWVARPAPGQSSIGLVSRKGSVANQSGLVDPLVTLFGSVHEKHTETGSMRSTLFPHFGSMFSVGGNQPRNEDWDEESLAREGDDYVSDAAVGDSDDNLQSPLISRQTTSLDKDIPPTAHSNLSSTRQGSLLHGNAGEPTGSTRIGSGWQLAWKWTEREDPNGNKEGGFKRIYLHQEGGPGLRGSVVSLPGGDIPNEGETVQAAALVSQPALYNKDVMRQQPVGPAMIHPSETTAKGPNWSDLSEPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLGSTSSSFLISAVTTLLMLPCIAVAMRLMDISGRRTLLLSTIPVLIASLIILVLGSFVDLGSTANASISTISVIVYFCFFVMGFGPIPNILCAEIFPTRVRGLCIAICALTFWICDIIVTYTLPVMLNSVGLSGVFGIYAFVCFIAWVFVFLKVPETKGMPLEVIIEFFSVGAKQVEDAKVQLT* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1895 740 PANTHER - 1 733 - -
Vra5g1895 740 SUPERFAMILY MFS general substrate transporter 6 719 IPR036259 -
Vra5g1895 740 PANTHER MONOSACCHARIDE-SENSING PROTEIN 1 1 733 - -
Vra5g1895 740 MobiDBLite consensus disorder prediction 359 410 - -
Vra5g1895 740 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016021|GO:0022857|GO:0055085
Vra5g1895 740 Gene3D MFS general substrate transporter like domains 2 247 IPR036259 -
Vra5g1895 740 CDD MFS_GLUT_like 13 193 - -
Vra5g1895 740 Gene3D MFS general substrate transporter like domains 498 737 IPR036259 -
Vra5g1895 740 CDD MFS_GLUT_like 515 712 - -
Vra5g1895 740 Pfam Sugar (and other) transporter 505 722 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vra5g1895 740 Pfam Sugar (and other) transporter 7 221 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vra5g1895 740 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra5g1895 740 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra5g1895 740 PRINTS Sugar transporter signature 527 537 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra5g1895 740 PRINTS Sugar transporter signature 626 647 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra5g1895 740 PRINTS Sugar transporter signature 649 661 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vra5g1895 740 ProSitePatterns Sugar transport proteins signature 2. 105 130 IPR005829 GO:0016021|GO:0022857|GO:0055085
Vra5g1895 740 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 714 IPR020846 GO:0022857
Vra5g1895 740 MobiDBLite consensus disorder prediction 355 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1895 Vra-Chr5 24711067 24716402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1895 1 736 Organic Solute Cotransporters AT4G35300 73.748 0.0 1046
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1895 - - gmx:100790278 1296.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1895 5 24711067 24716402 Vra5g1895 5 24711067 24716402 ECH
Vra5g1895 5 24711067 24716402 Vra11g0877 11 7420304 7424085 ECH