Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1207 ATGGATCCAAGCAACCTTTTACCAGCCAATGGACTTGAAGAGGTCTACCAAAATGGTGTTAATGGCAAGTTGTCTAACTCTGAAATGGATGGTATTGCCTCAAATGTAGACCCTGCTGTCACTAAAATTGCACAAACTGAAGCTCCAAATGGAATTTCTGAAAATTTCGTCCAGTATGATAGCACTGCAACTGATTACTCATCCAAGGCAGAAATCAAGGAAGGATTAAATGACTACATAGGTGTGAACAATGTCACCATTTCTAAGGAAGAGGAAGCAGAAATCGTAGATCAGACAGACCAATCAAAAGCAGGAAAAGGTCCTGTCAAGAGTAAGAATGCAAAGTCACCAAGCCCCAGAGGTGTTCATGCAAGTTCAATTAAAAAGAACAAAGATGGAAAAGGTGAAGAGGTAGCATCTACTGTTTCCAATGGTACTTTTGCTTCAGACTCCATCCCAAGAGAGCATATTAAAAATAGATCATTGACCGACAAGCAGGCTCGACTGTCGAAGCATGCTGGGAAGTCTAGCGTGGCACCTTCTGAAGCATCAATGGAGAAGAACAGACCACGATTATCAAAGAAAGGGCCCCCTGATAATCTTAATCTTCAAGGAGAAGCAGAATCTTCTTCTCCTACTGCAGAAGATGCAAAACCTCGCAGGGTAGGGATGCTCCCAAATTATGGATTCAGTTTCAAGTGTGATGAGCGAGCTGAGAGAAGAAGAGAGTTCTACACTAAACTTGAGGAAAAGATTCATGCAAAGGAAGTGGAGGAGAGTAACCTGCAAGCGAAAACAAAGGAGACCCAGGAAGCTGAGATTAAGATGCTTAGAAAAAGTCTAGGATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAGCCTCCTCCTCCTAGAGTAGAATTTAAAAAGATGCCCACTACAAGAGCTAAATCTCCCAAACTTGGTCGTAAGAAGAGTTCAGTGGTTTCGGAGTCAGAAGGAAACACTAGCAATAGTGTTCGACAAGGTCGATTAAGTCTGGATGAGAAAGTGTCTCAGACTAACCACACTAAAGGAGTTACTCTTGTTCATCAAAAGAGGCCACAACGAAAGTCTCTTCCTCCTCGACTGACTTCTGAAAAGACCAGTTCATCCAATCAGGCATCTATTCGGACCCCATCTAAGGCAGTGAATGATGACAAAACCTCGTTATCAGGTGTAACAACTGAAGTTACCACCTTATCCATTTCAACTGGGGAAGAGAAAGTTGAAGCAGTCGCAGCCACTGAAGAGAGCAGTGTCTTATTGGATGAGACAAGTAAAACTCTGCCTCTGATTGTAGAGCCAAGTGAAGCCAAGTCACCTGCTGTGAATGGTGATTTAGCCATTGAAGAGAAACCGCAACAACTCACCTTGTCACAAGAACCCATAGTGGCAGAGCTCTGA 1428 0.4321 MDPSNLLPANGLEEVYQNGVNGKLSNSEMDGIASNVDPAVTKIAQTEAPNGISENFVQYDSTATDYSSKAEIKEGLNDYIGVNNVTISKEEEAEIVDQTDQSKAGKGPVKSKNAKSPSPRGVHASSIKKNKDGKGEEVASTVSNGTFASDSIPREHIKNRSLTDKQARLSKHAGKSSVAPSEASMEKNRPRLSKKGPPDNLNLQGEAESSSPTAEDAKPRRVGMLPNYGFSFKCDERAERRREFYTKLEEKIHAKEVEESNLQAKTKETQEAEIKMLRKSLGFKATPMPSFYQEPPPPRVEFKKMPTTRAKSPKLGRKKSSVVSESEGNTSNSVRQGRLSLDEKVSQTNHTKGVTLVHQKRPQRKSLPPRLTSEKTSSSNQASIRTPSKAVNDDKTSLSGVTTEVTTLSISTGEEKVEAVAATEESSVLLDETSKTLPLIVEPSEAKSPAVNGDLAIEEKPQQLTLSQEPIVAEL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1207 475 MobiDBLite consensus disorder prediction 286 402 - -
Vra5g1207 475 MobiDBLite consensus disorder prediction 93 228 - -
Vra5g1207 475 PANTHER PROTEIN WVD2-LIKE 4 1 464 IPR044833 GO:0008017
Vra5g1207 475 Pfam Targeting protein for Xklp2 (TPX2) domain 230 301 IPR027329 -
Vra5g1207 475 PANTHER PROTEIN WVD2-LIKE 5-RELATED 1 464 - -
Vra5g1207 475 MobiDBLite consensus disorder prediction 322 356 - -
Vra5g1207 475 MobiDBLite consensus disorder prediction 153 171 - -
Vra5g1207 475 Coils Coil 245 275 - -
Vra5g1207 475 MobiDBLite consensus disorder prediction 369 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1207 Vra-Chr5 18473360 18480987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1207 - - gsj:114408962 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1207 5 18473360 18480987 Vra5g1207 5 18473360 18480987 ECH
Vra6g1570 6 31037079 31042246 Vra5g1207 5 18473360 18480987 PCT