Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1151 ATGAGCTTAACGAAAATGAATACTCTGAATGAAGTATACAAAGCACACCCTCTTACCCTTGATGATATCATCCCCATAGACTTTTCTTCTTCACCGAGTTTACCCGATTCCCATACATGGTCTCAACCCATTGATGATGATGATGATGATGATTTCTCATGGAACGATCCTGCATCATCATCCATACCCATCATAGACATGATGGATCCGAATGCGAAGAAACTCATAGCCCTTGCATGTGAGAACTGGGGTGCCTTCCATTTGAAGAATCATGGCATACCCTTAGATGTATCTCAAGGGGCTGAACAACAACTCCAACGCCTCTTCTCTCTCCCGACTCAACAAAAGATGAAGGCTCTCAGATCGCCCACCAGTGCCACTGGATATGGCGTCGCAAGGATTTCACCTTTCTTCTCCAAGTGCATGTGGCACGAAGGTTTCACCATCATCGGTTCTCCCTCTCACGATGCAAAAAAGTTATGGCCTCATGATTATCAACAATTCTGTGACACCATGGAGAAGTATGAGAAGCAAATGAGGAGAATAGCGGATAGACTGACAGAAATGATGTTGGAGGTGTTGGAGATTTCGGAGGAAAAAAGGAACTGGGTTGGTGGAAGCGACGTAAGTGCAGCTCTGCAGTTGAATTTCTACCCATGTTGTCCCGAACCGAACCGAGCCATGGGTTTGGGTCCTCACACAGACACTTCCATCTTCACAATTCTTCAAGCTAAATCGAGTGGTCTTCAACTCTTGAAGGAAGGAAAGTGGATCCCTGTGCATCCTCACCCCAACACTCTGATCGTTCACACAGGCGATTTTCTGCGCATCATGTCCAATGCACGCTTCTGCAGCCCAATTCATCGCGTTGTGCCGAACGAGAACGACGAACGTTACTCCATGGCTTATTTCTATTCTCCACCCACAGATTATACCGTGTCTCCGTCGGTGACCGGGGATCTTAACTCCGTCGCTCGTTTTCGTGATGTGACTGTGATGGAGTATATTGGGATCAAGGCTGAGAAATTTGGAGACTCCCTCTCTTTCATTAGCACTTGA 1059 0.4665 MSLTKMNTLNEVYKAHPLTLDDIIPIDFSSSPSLPDSHTWSQPIDDDDDDDFSWNDPASSSIPIIDMMDPNAKKLIALACENWGAFHLKNHGIPLDVSQGAEQQLQRLFSLPTQQKMKALRSPTSATGYGVARISPFFSKCMWHEGFTIIGSPSHDAKKLWPHDYQQFCDTMEKYEKQMRRIADRLTEMMLEVLEISEEKRNWVGGSDVSAALQLNFYPCCPEPNRAMGLGPHTDTSIFTILQAKSSGLQLLKEGKWIPVHPHPNTLIVHTGDFLRIMSNARFCSPIHRVVPNENDERYSMAYFYSPPTDYTVSPSVTGDLNSVARFRDVTVMEYIGIKAEKFGDSLSFIST* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1151 352 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 16 345 - -
Vra5g1151 352 SUPERFAMILY Clavaminate synthase-like 25 344 - -
Vra5g1151 352 Coils Coil 172 192 - -
Vra5g1151 352 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 162 IPR026992 -
Vra5g1151 352 Gene3D - 29 343 IPR027443 -
Vra5g1151 352 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 208 307 IPR005123 -
Vra5g1151 352 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 345 - -
Vra5g1151 352 Pfam 2OG-Fe(II) oxygenase superfamily 213 307 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1151 Vra-Chr5 17981812 17983154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1151 62 335 Glycosyltransferase AT5G59530 27.759 5.22e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1151 K04124 - gmx:100818754 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1538 6 30420431 30422541 Vra5g1151 5 17981812 17983154 PCT