Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0981 ATGAAGAAACTAAAACATTATTACCATCAACAGCATCATCAACAACAACGAAAGTACATTGTCCCAGTAATCACCATCGCCTCCTTCATCTCCCTCATCTCCCTCCTCCTTTTCGCCCTCAGACTAACCTCCCCCGACGCCACCCTCATCTTCCCCTTCCCCCTCTCCGCCGTCATCTCTGCCCCATCCCCCTTCGTCGAGTCCAAGCTTCACGCTCTCCCACTCCCTCCCCCATCCCCTCTTCCCCCCGTCCTCGCCTACCTAATCTCCGCCTCCGCCGGCGACGCCCCTGCCCTCCTCCGAGCCCTATCCGCCCTCTACCATCCCCGCAACCGCTACATCCTCCACCTCGACCGCCATTCCTCCCCCGAGGAACGCCACCTCCTCGCCGCCCACATCGAACGTCACCCCACCTTCCGACAATTCCGCAACGTCCGCCTTATCTCCAAAGCCAACCTCATTACCTACCGCGGCCCCACCATGGTCGCCAACACCCTCCACGCTGCCGCCATCGCCCTCTCCGACACCCATTACTGGGATTGGTTCATCAACCTCAGCGCCTCCGATTATCCCCTCGTTACCCAAGACGATCTGCTGCACGCGTTGTCGCAATTGCCACGGGATCTTAATTTCATTGATCATACAAGTGACATTGGGTGGAAAGATCATCAACGGGCAAGGCCTATAATTATTGATCCGGGGTTGTATATGACTAAGAAGCAAGATGTGTTTTGGATAACACAGAGGAGAAGTAAACCAACGGCCTTCAAACTTTTCACAGGTTCGGCTTGGATGGTACTATCAAGATCTTTCATTGATTACTGTATATGGGGATGGGACAACCTACCTCGTACTGCTCTCATGTACTACACAAATTTCGTATCTTCCCCTGAAGGGTACTTCCACACTGTCATTTGTAATGCTCAAGAGTTCAAGAACACAACTGTTAATAGTGATCTTCACTTCATTTCTTGGGACAATCCTCCCAGACAACATCCCCACTACCTTTCTCTCGATTACATGGAAAGGATGGTTGACAGCAACGCCCCCTTCGCGAGGAAGTTCCACGGAGACGATCCAGTATTGGACAAAATCGATGCAGAGCTTTTGTCCAGAGGTCCTGGGATGGTTGTTCCTGGTGGCTGGTGCATAGGAAGCAGGGAGAATGGGAGCGATCCTTGTTCTGTAGTTGGTAATACTACTTTCCTTAGGCCTGGCCCAGGTTCTAAAAGGCTTCAAACTTTGATCAGTTCAATGTTGTCTGATGAAAATTTTCGACCAAAACAGTGTGTATGA 1296 0.5154 MKKLKHYYHQQHHQQQRKYIVPVITIASFISLISLLLFALRLTSPDATLIFPFPLSAVISAPSPFVESKLHALPLPPPSPLPPVLAYLISASAGDAPALLRALSALYHPRNRYILHLDRHSSPEERHLLAAHIERHPTFRQFRNVRLISKANLITYRGPTMVANTLHAAAIALSDTHYWDWFINLSASDYPLVTQDDLLHALSQLPRDLNFIDHTSDIGWKDHQRARPIIIDPGLYMTKKQDVFWITQRRSKPTAFKLFTGSAWMVLSRSFIDYCIWGWDNLPRTALMYYTNFVSSPEGYFHTVICNAQEFKNTTVNSDLHFISWDNPPRQHPHYLSLDYMERMVDSNAPFARKFHGDDPVLDKIDAELLSRGPGMVVPGGWCIGSRENGSDPCSVVGNTTFLRPGPGSKRLQTLISSMLSDENFRPKQCV* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0981 431 PANTHER BETA-GLUCURONOSYLTRANSFERASE GLCAT14A 12 430 - -
Vra4g0981 431 PANTHER GLYCOSYLTRANSFERASE 12 430 IPR044610 GO:0015020
Vra4g0981 431 Pfam Core-2/I-Branching enzyme 85 344 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0981 Vra-Chr4 16922958 16926014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0981 1 430 Glycosyltransferase AT5G15050 66.133 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0981 K20891 - gmx:100794724 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0981 4 16922958 16926014 Vra4g0981 4 16922958 16926014 ECH
Vra1g1077 1 13074682 13080742 Vra4g0981 4 16922958 16926014 PCT