Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0794 ATGGGTTTCAATTTGATTCTATGGTATCATCCCAATCTGGTTCTCGCTGTTCTGCTGCTCTTTTCCTGTTCCTTTGGTCTTTTCTCTGCAAATGATGAAGTGGGCACCGGTCAAGGTGAAACCTTTACTGTTTCAAGCTTCAGTTACCCTGAGACTAGGCTCAGACCCTTTGATTTGCGCTACATCAGAGTTGACTTGCCACCATGGTTTTCTGCACTGTCTATAGCATTGAAGTCAGATGTAGACATTGATATCTCAAGAATTGAAAGGGTTCCAATACGCACATTGCCAATAATATGCTTTAGAGATGGAAGTCCTCCACTACCAGATGCCTTAAACACATCTCTGAAAGATTCAGCCACTTCTGGAATAAATGGTCTAGATGTGGAGCAGTGCTTTCCCATGCAGAAAAATATCACTATGAAACTGACAAACAATCAGATATCTCCAGGTGTTTGGTATATTGGTCTTTTCAATGGGATTGGACCTACAAGGACACAATCAAAGATGACATTTGTAAGGAGAGGTTCAACCCCTTTTGAATCGTATTATTTACCGGTTGGTGGAGCATCTTATGATTCTGCCAATTTCCCTCTTGAGCCACTTTTAAAGAACTCATCATACATTGGAGAATCTGATAACATTTGGACTTACTTTCTTTTGGACATTCCTCGTGGTGCTGCTGGAGGAAATATTCATATACAGCTATCCTCAGATACAAAGATTGGTTATGAAGTGTATGCTAGATTTGGTGGTTTACCATCTCTAGATATCTGGGACTATTATTATGCTAACAAGACCAGGAGAAGTGACCCATCTATGTTTTTCACGCTGTATGACTCAAGTGATACCAAAGTTAACTTTTATATTATGTATGCTAGAGAAGGAACTTGGGGCTTTGGTCTAAGACATCTTAATAGCAACGGTGATTCCATAAAAGGACTAAATATCATGTCCATTTCACTTGAGCGATGCCCAAAACGATGTTCCTCTCATGGAGACTGTAAATTTTCGTTTGATGCTAGTGGACTAACGTCTTACAGCTTCTGCTCCTGTGATCGAAACCATGGAGGCTTTGACTGCAGCATTGAGATTGTAACACATCAAGGGCATGTTCGACAATCAATTTTTCTCATTGTATCAAATGCTGCTGCCATACTTCCTGCCTATTGGGCCCTTCGGAAGAAGGCATTAGCAGAATGGGTTTTATACACATCCAGTGGGATTTCAAGTGGACTATATCATGCGTGTGATGTGGGCACTTGGTGTGCGTTGAGCTATAATGTCTTACAGTTCATGGACTTTTGGCTCTCATTCATGGCTGTGATTAGCACTTTTCTTTATCTAACTACCATTGATGAAGTATTTAAGAGGGCAATCCACACAGCTGTTGCTATCCTTACTGCTCTAATGGCTGCAACAAAAGCAACCAGGTCTTCCAATGTTATTCTTGTGATTGTGATCGGTGCTCTTGGTTTGTTTGTTGGATGGTTGATAGAAATCTCAACAAAGTATCGGTCCCTTTCCTTTCCAATTGGAATCTCATTTAACTTCTCTCACTGTTTCCAAACTATAAAGCGATGGCTCTATAATCTTGTCAAGACACTTTTGAGACGGTACCACTTGGCATTTGCCTTGGCTGGTTTTACTGCATTGGCCATGGCAGCAATAAGCTGGACACTTGAAACCAGTGAATCCTACTGGTTTTGGCACAGCATTTGGCATATTACAATATACACATCTTCTTTCTTCTTCCTTTGTTCAAAAGCAAACATTGAGGACAGTGAGGCAACACATCCTACGGATGGAGACTATGAACTGACTCATCAGGATTCACTTCCAAGAAGTGGTTAG 1854 0.4094 MGFNLILWYHPNLVLAVLLLFSCSFGLFSANDEVGTGQGETFTVSSFSYPETRLRPFDLRYIRVDLPPWFSALSIALKSDVDIDISRIERVPIRTLPIICFRDGSPPLPDALNTSLKDSATSGINGLDVEQCFPMQKNITMKLTNNQISPGVWYIGLFNGIGPTRTQSKMTFVRRGSTPFESYYLPVGGASYDSANFPLEPLLKNSSYIGESDNIWTYFLLDIPRGAAGGNIHIQLSSDTKIGYEVYARFGGLPSLDIWDYYYANKTRRSDPSMFFTLYDSSDTKVNFYIMYAREGTWGFGLRHLNSNGDSIKGLNIMSISLERCPKRCSSHGDCKFSFDASGLTSYSFCSCDRNHGGFDCSIEIVTHQGHVRQSIFLIVSNAAAILPAYWALRKKALAEWVLYTSSGISSGLYHACDVGTWCALSYNVLQFMDFWLSFMAVISTFLYLTTIDEVFKRAIHTAVAILTALMAATKATRSSNVILVIVIGALGLFVGWLIEISTKYRSLSFPIGISFNFSHCFQTIKRWLYNLVKTLLRRYHLAFALAGFTALAMAAISWTLETSESYWFWHSIWHITIYTSSFFFLCSKANIEDSEATHPTDGDYELTHQDSLPRSG* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0794 617 Pfam Protein of unknown function (DUF3522) 371 576 IPR021910 GO:0016021
Vra4g0794 617 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 173 616 - -
Vra4g0794 617 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 14 170 - -
Vra4g0794 617 ProSitePatterns EGF-like domain signature 1. 350 361 IPR000742 -
Vra4g0794 617 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 173 616 IPR021910 GO:0016021
Vra4g0794 617 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 14 170 IPR021910 GO:0016021
Vra4g0794 617 Gene3D - 190 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0794 Vra-Chr4 14776652 14784899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0794 - - gmx:100787532 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0794 4 14776652 14784899 Vra9g0555 9 6096355 6104034 PCT