Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0779 ATGGCTCTGGGTGGTTTGCTTTCCAACACAAACTTCACTTCTTTCATTGGACCAGGAAATTTATATCATTTGGGAAAGGATCTATCACCTCAAAGAGGGGACGTTTCTTGTGCATTTGTTGCACGTTATGGTGGCCAGATTGCAAATGATCATTTCTCAAGATGCTGGCATGGGATGCGTTTTCATGCTAGAGAACCTTTCAATGAGAAAGTTTCAAAACTAATACCAACATTTGAAGATGAATTGCAGCGTTGTTCTTCAATATCGCAGAGACCTATACACTGCATGAACATGAAACTAAACGCCAGCAGAAGATGTCACTGCAACCTCTCTTCAGATCTCTATAGCTGTAGCCTTGTTCAACGAAGAGCAGTATATGGACTAGGTTTAAACAAACACGGTAAGGCTAATCCGGCTTGTGTTCATTACAAGTCTGAGGATTGTGATATTACAGAATCAGAGGTGAATCCTCTTGCATCAGCTGAAGGGACAGGTGAAGCCATTCTCTTGGAAGGGAATGTTCCACAAGTATCTTCTTGGTGGCAGAAGTTTCCAAAGCGTTGGGTTGTTGTGTTGCTATGTTTTGCAGCATTTCTGCTGTGCAACATGGATCGTGTGAATATGAGCATAGCAATACTTCCAATGTCTCAAGAATTTAACTGGAACAGTGCAACAGTTGGCCTAATTCAGTCATCTTTCTTCTGGGGCTACCTTCTTACCCAGATCCTTGGTGGCATATGGGCCGACAAACTTGGTGGGAAACTAGTGCTAGGTTTCGGAGTTGTCTGGTGGTCAATGGCAACAATTTTAACACCTATTGCTGCAAGAATTGGGCTCCCTTGTTTGCTTATTATGCGTGCATTTATGGGGATCGGTGAGGGTGTTGCCATGCCTGCTATGAATAATATGCTTTCCAAGTGGATTCCAGTTTCAGAGAGAAGCAGATCACTGGCCCTAGTATATAGTGGCATGTACCTTGGTTCGGTGGTTGGATTGGCATTCTCACCATTACTAATCCAAAAATTTGGGTGGCCATCAGTTTTTTACTCTTTTGGATCCCTTGGAAGTATCTGGTTTGCCTTGTGGTTAAGAAAGGCATATAGCTCCCCAAAAGATGACCCAGATCTTGGGATAGAGGAGAAAAGGCTCATACTAGAAGGCAATGTATCAAATGCACCTGTTTCTTCCATTCCTTGGAAATTAATTTTATCAAAAGCACCGGTTTGGGCTCTTATAATCTCCCACTTCTGTCACAATTGGGGGACTTTTATTCTTCTGACCTGGATGCCTACTTATTATAATCAGGTTCTGAAGTTCAACCTCACTGAATCTGGGCTCTTATGTGTTCTTCCATGGTTAACCATGGCTGCTTTTGCAAATATTGGTGGGTGGATTGCTGACACACTTGTGAGAAAAGGCGTCTCCATAACAGCTGTTCGAAAGATCATGCAATCAATAGGATTTCTGGGTCCTGCATTTTTTCTTTCTCAACTGAGCCATGTCAGAACACCTGCCATGGCTGTACTATGCATGGCGTGTAGTCAGGGATCTGATGCGTTCTCACAATCTGGTCTCTATTCCAATCACCAAGACATTGGACCCCGCTATGCTGGTGTATTGCTTGGACTATCAAATACGGCAGGAGTGCTTGCTGGTGTATTTGGTACAGCTGCAACTGGTTTAATACTCCAGCGAGGTTCTTGGAATGATGTTTTTAAGGTTGCTGTTGCTTTGTACATAATAGGGACATTGGTGTGGAATATCTTTTCTACTGGAGAGAAAGTTCTTGACTGA 1794 0.4303 MALGGLLSNTNFTSFIGPGNLYHLGKDLSPQRGDVSCAFVARYGGQIANDHFSRCWHGMRFHAREPFNEKVSKLIPTFEDELQRCSSISQRPIHCMNMKLNASRRCHCNLSSDLYSCSLVQRRAVYGLGLNKHGKANPACVHYKSEDCDITESEVNPLASAEGTGEAILLEGNVPQVSSWWQKFPKRWVVVLLCFAAFLLCNMDRVNMSIAILPMSQEFNWNSATVGLIQSSFFWGYLLTQILGGIWADKLGGKLVLGFGVVWWSMATILTPIAARIGLPCLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLALVYSGMYLGSVVGLAFSPLLIQKFGWPSVFYSFGSLGSIWFALWLRKAYSSPKDDPDLGIEEKRLILEGNVSNAPVSSIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAAFANIGGWIADTLVRKGVSITAVRKIMQSIGFLGPAFFLSQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGLILQRGSWNDVFKVAVALYIIGTLVWNIFSTGEKVLD* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0779 597 ProSiteProfiles Major facilitator superfamily (MFS) profile. 190 594 IPR020846 GO:0022857
Vra4g0779 597 SUPERFAMILY MFS general substrate transporter 176 589 IPR036259 -
Vra4g0779 597 Pfam Major Facilitator Superfamily 194 555 IPR011701 GO:0022857|GO:0055085
Vra4g0779 597 PANTHER ANION TRANSPORTER 4 25 597 - -
Vra4g0779 597 Gene3D MFS general substrate transporter like domains 185 374 IPR036259 -
Vra4g0779 597 CDD MFS_SLC17A9_like 191 590 IPR044777 -
Vra4g0779 597 PANTHER SOLUTE CARRIER FAMILY 17 25 597 - -
Vra4g0779 597 Gene3D MFS general substrate transporter like domains 402 594 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0779 Vra-Chr4 14588624 14594838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0779 1 597 Organic Solute Cotransporters AT4G00370 71.189 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0779 K08193 - gmx:100784401 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0779 4 14588624 14594838 Vra4g0779 4 14588624 14594838 ECH
Vra4g0779 4 14588624 14594838 Vra9g0563 9 6251240 6258213 PCT