Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0413 ATGGAATTGGGAAGCATAATTCACTTCCTTCAGGATAAGACCATCTTAGTCACTGGTGCCACTGGTTTTCTTGCAAAAATTTTTGTAGAAAAAATATTGAGGGTTCAACCAAATGTGAAGAAACTTTATCTGCTTTTGAGAGTTAAAGATACTGAATCCGCTACTCAACGCTTAGATAACGAGATCATAGGGAAGGACTTGTTTAGATTGCTGAAGGAAAAACTGGGAACAAGATTCAGTTCCTTTATCTCAGAAAAGCTCACTGTGGTACCTGGAGACATTTCTCATGAGGACTTGAATTTGAAGAACTCCATTCTGAGGGAAGAAATTTGTAACCAAACAGATGTTATAGTTAATCTAGCTGCAACAACTAACTTCGATGAAAGATACGATGTTGCACTGGGTATAAATACATTAGGAGTTAAACATGTGATGAGCTTTGCCAAGAAATGTGTAAAGCTGAAGGTGTTTGTCCACGTATCAACAGCTTATGTATGTGGAGAAAGAGGAGGACTGATACTAGAGGATCCACATCAGTTTGGTGTGTCACTAAATGGAGTGAGAGGACTAGACATTGAAATGGAAAAGAAGAAGGTAGAGGAGAAACTGAATGAGCTGAAAGAGGAGGGAGCTACAGAACATGATATTGAATTGGCCATGAAGAACTTGGGAAGTAAAAGAGCAACGATGTATGGATGGCCAAACACGTATGTGTTTACAAAGGCAATGGGAGAAATGATTGTAGGAACTACAAAGGGAAACATGAACGTAGTAATTGTACGTCCCACAATCATTACTAGTACTTACAGAGAACCTTTCCCTGGTTGGATCGAAGGTTTAAGAACCATAGACAGCTTGATTGTTGCTTATGGTAAAGGAAAGTTAACTTGCTTCCTTGCGGATCTGAAGGCTGTTTTTGATGTGATACCAGCAGACATGGTGGTGAATGCAATCCTAGTGAGCACGGTGGCTCATGCAAATCAACATAGTGACATGATATACCATGTGGGTTCCTCTGTTGCAAATCCAGTTAGGTACCTTAATCTTCGAGACTGCGCCGTAAGATATTTCAAGGAAAAACCTTGGATAAACAAGGAAGGAAAGGCCGTTAAGGTTGGGAAAGTTACCATATTGAGCAACATGGATAGCTTCTACAGATATATGTACATTCGTTATCAGCTTCCCTTAAAGGGACTGGAGCTGGTGAATGCAGCTTCGTGCCATTATTTTGAGGAAATTTGTGTGGACTTCAATAGGAAGATCCGCACAATCATGCGATTGGTTGAGCTTTACAAGCCTTACTTGTTCTTCAATGGGATATTTGATGATTTGAACAGAGAAAAGTTGTTGTCAATGGGAAGAGAAAGTGGAGTAGAGACTGAATTGTTTTACTTTGACCCCAAAATCATTGATTGGGAAGACTATTTCATGAATATCCATTTTCCTGGAATCATAAAGTATGCTTTCAAGTGA 1473 0.3951 MELGSIIHFLQDKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRVKDTESATQRLDNEIIGKDLFRLLKEKLGTRFSSFISEKLTVVPGDISHEDLNLKNSILREEICNQTDVIVNLAATTNFDERYDVALGINTLGVKHVMSFAKKCVKLKVFVHVSTAYVCGERGGLILEDPHQFGVSLNGVRGLDIEMEKKKVEEKLNELKEEGATEHDIELAMKNLGSKRATMYGWPNTYVFTKAMGEMIVGTTKGNMNVVIVRPTIITSTYREPFPGWIEGLRTIDSLIVAYGKGKLTCFLADLKAVFDVIPADMVVNAILVSTVAHANQHSDMIYHVGSSVANPVRYLNLRDCAVRYFKEKPWINKEGKAVKVGKVTILSNMDSFYRYMYIRYQLPLKGLELVNAASCHYFEEICVDFNRKIRTIMRLVELYKPYLFFNGIFDDLNREKLLSMGRESGVETELFYFDPKIIDWEDYFMNIHFPGIIKYAFK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0413 490 CDD FAR-N_SDR_e 13 361 - -
Vra4g0413 490 PANTHER FATTY ACYL-COA REDUCTASE 2 488 - -
Vra4g0413 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 488 IPR026055 GO:0080019
Vra4g0413 490 Pfam Male sterility protein 17 318 IPR013120 -
Vra4g0413 490 Coils Coil 189 209 - -
Vra4g0413 490 CDD FAR_C 419 489 IPR033640 -
Vra4g0413 490 Gene3D - 8 377 - -
Vra4g0413 490 Pfam Male sterility protein 392 490 IPR033640 -
Vra4g0413 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 334 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0413 Vra-Chr4 7034888 7038101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0413 110 489 Acyl Lipid Metabolism Gene Families AT4G33790 63.158 1.78e-180 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0413 K13356 - gmx:100789566 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0413 4 7034888 7038101 Vra2g0839 2 7786848 7791020 PCT