Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0401 ATGAATATGGCAGATATAATATCTTGCTTCAATGAGAACGCAGTGAATGTGTCACACTCTTCGTGTTCTAGCTACTCAAACAACGCCTGCATATCTCCCAGTGTTACACCTTCAACGCAGAACTCGGTGACCTCTGTCTACAAAACCACCCTTTCCAACCAAAAGCAGGTTCTGATCACGGTCACGTGGTGCAAGAGCCACTCCAACCAAGGACTCACAATAAGCTTCGGCGAAGAGAACCCTTTGGAACCATCTTTCAGGCTCAACACAAATTCGCGGTTTTTCAGGAAAAAGAAAGGAAGCAAGGTCCTAGAATCCCAAGACTCCAAGGTTGAGGTCTTCTGGGACCTGTCGAAGGCCAAGTACGACACTGGTCCCGAACCTGTTGAAGGGTTTTACGTGGCGATTCTGGTTGATGCTGAGATAGGCCTCGTTCTTGGAGAAGAAGATGTGGTGAAGAAGTTCAAAACGAGAACCCTTTTGGCCAAAGTTTCGCTTTTGTCACGGCGTGAACATTGCTCCGGGAACGCCGTTTACGCCACCAAGGCTCAGTTCTGTGACAGCGGAACTTGGCATGACATTTTGATCCGATGCAGCGGGGAGAATGAGGGCCTGAAAGCTCCTGTTTTGTCCGTTTGCATTGACAAGAAAACGGTGATCCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGCAACCAAACGATTTTTGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAACCCTGCTTCTGGTTATGCAGTGTTCATGTTCAGGACCAGAAGTGGCTTGGATAGCAGATTGTGGTTAGAGGAAAAGATTGCACAGAAAGACAAAGACAGAGTTGAATTCTCCTTGTTGATCTATGCATGTAAGAGCACATGA 903 0.4718 MNMADIISCFNENAVNVSHSSCSSYSNNACISPSVTPSTQNSVTSVYKTTLSNQKQVLITVTWCKSHSNQGLTISFGEENPLEPSFRLNTNSRFFRKKKGSKVLESQDSKVEVFWDLSKAKYDTGPEPVEGFYVAILVDAEIGLVLGEEDVVKKFKTRTLLAKVSLLSRREHCSGNAVYATKAQFCDSGTWHDILIRCSGENEGLKAPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPASGYAVFMFRTRSGLDSRLWLEEKIAQKDKDRVEFSLLIYACKST* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0401 300 PANTHER EXPRESSED PROTEIN 3 299 IPR008586 -
Vra4g0401 300 Pfam Plant protein of unknown function (DUF868) 38 298 IPR008586 -
Vra4g0401 300 PANTHER DUF868 FAMILY PROTEIN 3 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0401 Vra-Chr4 6924822 6926874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0401 3 299 EF-hand Containing Proteins AT5G28150 39.274 1.11e-60 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0401 - - gmx:100798692 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0401 4 6924822 6926874 Vra4g0401 4 6924822 6926874 ECH
Vra4g0401 4 6924822 6926874 Vra2g0820 2 7495351 7496892 PCT