Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0820 ATGAGAGACTTTGTTACTTGTTTCAGCGAGAACGCTGTTGGCGTGTCTCATTCTTCAATATCGTGTTCTTCTTATTCGAACAACGCATGCATCTCTCCCTCCAACGTTGCACCCTCCACCCAGAACTCTGTTTCCAGCGTCTACAAGCTTGTTCTCTCCACGTTAAAGCAAATTCTGGTCACAGTCTCATGGTGTAGGAGCCACTCCAACCAAGGACTCGCCATAACCTTCAACCACGAGGACCCTCCATCCTTTAGACTCAACACCACCAATTCACGCTTTTTCAGGAAGAAAAAGGGCACCAAAATCCTCGAACCCTTTTCTTCTGACTCGTCCAAGGTTGAAATTTTCTGGGATCTTTCAAACGCCAAGTACGAATCCGGTCCCGAACCCGTTCAGGGCTTTCACCTTGTGATCATCATTGACTCGGAAATTGGCCTGGTTCTCGGTGACACCGCTGAAGAAACAGTTCTTTCCAAGAAGCTCAATTTCAGAAGCAGCAACATAAACACGGGTTTGGCTAAGGTTTCTCTTTTGTCACGAACAGAGCATTGTTCTGGAAGCACCCTTTACTCCACCAAGGCTCAGTTCTGCGACACCGGCACGTGCCACGACGTTATGATCAGATGCAGTATGGAGAAGGAGAATGAAGGGTTGTTCAAGTCACCGGTTTTGTGCGTGTGCATAGATAAGAAGACCGTGATTCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGGAATCAAACGATTTTCGTTGATGGGTTGCTGGTTGATTTGCTTTGGGATGTTCATGACTGGTTCTTCACCCCTTCTTCTTCTTCTTCATCTTCTTCTGGGTATGCAGTGTTCATGTTCAGAACTAGGAGTGGCATGGATAGCAGGTTGTGGTTGGAGGAAAAGAATGCACAAAAAGATAAAGACAGGGTTGAATTCTCCTTGTTGATCTATGCATGTAAGACTACATAA 966 0.4627 MRDFVTCFSENAVGVSHSSISCSSYSNNACISPSNVAPSTQNSVSSVYKLVLSTLKQILVTVSWCRSHSNQGLAITFNHEDPPSFRLNTTNSRFFRKKKGTKILEPFSSDSSKVEIFWDLSNAKYESGPEPVQGFHLVIIIDSEIGLVLGDTAEETVLSKKLNFRSSNINTGLAKVSLLSRTEHCSGSTLYSTKAQFCDTGTCHDVMIRCSMEKENEGLFKSPVLCVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHDWFFTPSSSSSSSSGYAVFMFRTRSGMDSRLWLEEKNAQKDKDRVEFSLLIYACKTT* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0820 321 Pfam Plant protein of unknown function (DUF868) 39 319 IPR008586 -
Vra2g0820 321 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Vra2g0820 321 PANTHER EXPRESSED PROTEIN 1 320 IPR008586 -
Vra2g0820 321 PANTHER DUF868 FAMILY PROTEIN 1 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0820 Vra-Chr2 7495351 7496892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0820 1 320 EF-hand Containing Proteins AT5G28150 33.230 7.91e-52 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0820 - - gmx:100794621 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0820 2 7495351 7496892 Vra2g0820 2 7495351 7496892 ECH
Vra4g0401 4 6924822 6926874 Vra2g0820 2 7495351 7496892 PCT