Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0362 ATGTCAGAGCAAAAGAAACCCCCCAAAAGCAGGGTTTTCTTTGTTGGGATGAAGCTTCTGCATAAACCAGGAAACAAGCCTCCACAAGATAAAAACACTTTCTTTCATACATATTACAAATGGGTTCTTTGGCTTTCTCTTTCCTTCTATTTCTTCACTTCCTATCTCATCACCACCAACCCCAACACCACACCAACCTCTCCAGATACATCGTCCCACGCTGTCCCCCGTGCCCTTATCGACTCCACAACCAACTCTCTAGGGATGTTGAAGAATCTGAAGATGTTCGTGTACGAGCTTCCTCCGAAGTACAACACCCATTGGCTCGCAAACAAGAGGTGTGGCAACCATTTATTCGCGTCGGAAGTGGCCATCCACAGGGCACTGTTAACGAGCGAGGTTCGCACGTTTGATCCTTATGAAGCTGACTTTTTCTTCGTACCCGTTTACGTTTCTTGCAACTTCAGCGCCGTGAACGGCTTCCCCGCGATTGGGCACGCGCGCTCTCTTATTTCCTCCGCCGTCAACTTCGTGTCCACGGAATACCCTTTCTGGAACCGCAGCAAGGGACGTGACCATGTCTTCGTCGCTTCCCACGACTTCGGTGCGTGTTTCCACAGCCTGGAGGATGCGGCCATGGCTGATGGAATACCCCAAATTTTGAGGAATTCCATTGTGTTGCAGACATTCGGCGTTGTTCACAGGCATCCGTGTCAAGACGTGGAGAACGTCGTGATACCACCTTACGTTTCGCCGGAAAGTGTACGGAGCACGCTGGAGAATTTTCCGGTTAACGGTCCGCGAGAAATTTGGGCGTTTTTCCGTGGGAAAATGGAATTGCATCCTAAAAATATCAGTGGACGGTTTTACAGCAAGCGAGTAAGGACGGAGATTTGGCGGAAGTTCAACGGTGACCGGAGGTTTTACCTGCAAAGGCACAGGTTTAGCGGTTACCAGTTGGAAATTGCTCGATCGGTGTTCTGTTTGTGCCCGTTAGGGTGGGCTCCGTGGAGTCCGAGGTTAGTTGAATCCGTTGCATTGGGCTGTGTGCCGGTTATTATTGCGGATGGGATTCAGTTACCGTTTTCCTCGACCGTGCGTTGGTCGGAGATATCGCTGACGGTGGCGGAGAGGAACGTGGGGAAGTTAGGAAAGATTCTTGAGCACGTGGCAGCGACAAACCTGAGTGTCATTCAGAGGAATTTGTGGAACCCGCGAACGAGGCGGGCCCTACTTTTCAACAAGAAGATGGAGTACGGCGACGCCACGTGGCAAGTTCTGGTGAGTTTGAGTGAGAAGCTCCATAGGTCTTACCGAAGGTCTTCGGGTAGTGACGAATTAGAGAGTGACACGTGA 1356 0.5081 MSEQKKPPKSRVFFVGMKLLHKPGNKPPQDKNTFFHTYYKWVLWLSLSFYFFTSYLITTNPNTTPTSPDTSSHAVPRALIDSTTNSLGMLKNLKMFVYELPPKYNTHWLANKRCGNHLFASEVAIHRALLTSEVRTFDPYEADFFFVPVYVSCNFSAVNGFPAIGHARSLISSAVNFVSTEYPFWNRSKGRDHVFVASHDFGACFHSLEDAAMADGIPQILRNSIVLQTFGVVHRHPCQDVENVVIPPYVSPESVRSTLENFPVNGPREIWAFFRGKMELHPKNISGRFYSKRVRTEIWRKFNGDRRFYLQRHRFSGYQLEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIQLPFSSTVRWSEISLTVAERNVGKLGKILEHVAATNLSVIQRNLWNPRTRRALLFNKKMEYGDATWQVLVSLSEKLHRSYRRSSGSDELESDT* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0362 451 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 28 444 IPR004263 GO:0006486|GO:0016757
Vra4g0362 451 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 28 444 - -
Vra4g0362 451 Pfam Exostosin family 91 389 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0362 Vra-Chr4 6477952 6480178 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0362 K20889 - gmx:100807050 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0362 4 6477952 6480178 Vra4g0362 4 6477952 6480178 ECH
Vra4g0362 4 6477952 6480178 Vra2g0771 2 6878245 6881067 PCT