Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0771 ATGGCTCTGCACAAAACACCCCCAAATAGCAGGGGGTACTATGTTAAGATGAAGCTCCTTCACAAACATGGAAGACCTCATCACCAGCAAGAAAAAAACTGCTTTTACAAATACTACAAATGGCTTCTATGGCTCTCTCTTTCCCTTTATTTCTTCACTTCCTACCTCATAAGCAACAACAACCACGCCAAACAACCCTCTCACCACCAAACAACTCATGTCTCCAGAACTCTCATTGAATCAAACAAGACAGCTCCTTCGCAATCTCTGCACTCTCTAGGGTCTTCGTCGCTGAACAACTTGAAGGTGTTTGTGTACGATCTTCCGCCCAAGTACAACACGGATTGGTTATCGAACGAGAGGTGTAGCAAGCATTTGTTCGCGTCGGAGGTTGCCATTCACAGGGCTCTGTTGACTAGCGAGTTCCGCACTTTTGACCCTTACGAAGCTGACTTTTTCTTCGTACCCGTTTACGTCTCTTGCAACTTCAGCACCGTCAATGGCTTTCCCGCGATTGGTCACGCGCGCTCCCTCATCGCTTCCGCTGTCAACCTCCTCTCCTCGGAGTACCCTTTCTGGAACCGGAGCAGGGGCTCCGACCACGTCTTCGTCGCCTCGCATGACTTCGGCTCGTGTTTCCACACGCTGGAGGACGTGGCGGTGGCTGATGGCGTCCCAGAAATCATGAGAAACTCGATCGTGTTGCAGACGTTTGGCGTTGTGTACGACCACCCATGTCAGAAGGTTGAGCACGTGGTGATTCCGCCGTACGTTTCGCCGGAAAGTGTCCAGGACACGATGGATAACTCTCCGGTGAACGGACGGCGAGATATTTGGGTTTTCTTCCGAGGGAAAATGGAACTTCATCCCAAGAACGTTAGTGGAAGATTTTACAGCAAGAAAGTGAGGACAATGATATGGCGAAAGTTCAACGGTGACCGGAGGTTTTACCTACAGAGACACAGGTTTGCCGGTTACCAGTCAGAGATTGCACGCTCGGTGTTTTGTCTGTGCCCTTTGGGGTGGGCCCCGTGGAGCCCGAGGCTGGTAGAGTCCGTTGCTCTGGGTTGCGTGCCGGTAGTTATAGCGGACGGTATCCGTCTGCCGTTTCTCTCCGCCGTGAAATGGTCGGAGATATCGATCACGGTGGCGGAGAGGGACGTCGGGAGACTGGCGGAGATACTGGAGCGCGTGGAGGCGACGAACCTGAGCACGATTCAAAGGAACCTGTGGGACCCGGCGACGAGAAGGGCGCTACTTTTTAACAGCCAGGTTCGGGAAGGGGATGCCACGTGGCAGGTGCTACGTGCTTTGAGCGAAAAGCTGGACAGGTCCTACAGGGGTTCGAGGGTTTCACGCCAATTGGATTTTGACACGTAA 1380 0.5275 MALHKTPPNSRGYYVKMKLLHKHGRPHHQQEKNCFYKYYKWLLWLSLSLYFFTSYLISNNNHAKQPSHHQTTHVSRTLIESNKTAPSQSLHSLGSSSLNNLKVFVYDLPPKYNTDWLSNERCSKHLFASEVAIHRALLTSEFRTFDPYEADFFFVPVYVSCNFSTVNGFPAIGHARSLIASAVNLLSSEYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAVADGVPEIMRNSIVLQTFGVVYDHPCQKVEHVVIPPYVSPESVQDTMDNSPVNGRRDIWVFFRGKMELHPKNVSGRFYSKKVRTMIWRKFNGDRRFYLQRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFLSAVKWSEISITVAERDVGRLAEILERVEATNLSTIQRNLWDPATRRALLFNSQVREGDATWQVLRALSEKLDRSYRGSRVSRQLDFDT* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0771 459 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 28 447 IPR004263 GO:0006486|GO:0016757
Vra2g0771 459 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 28 447 - -
Vra2g0771 459 Pfam Exostosin family 99 397 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0771 Vra-Chr2 6878245 6881067 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0771 K20889 - gmx:100782077 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0771 2 6878245 6881067 Vra2g0771 2 6878245 6881067 ECH
Vra4g0362 4 6477952 6480178 Vra2g0771 2 6878245 6881067 PCT