Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0355 ATGGGTCAGAAACAGGCGAAGAAGAACGATTATGACCACAAGAACGAGAAAGCAAGGAAGAACGAGGAAACGTCGTACCCGACCACCGTTGTCTTGAAGATCGACATGCACTGTGACGAATGCGCATCAAAAGTCATCAAATGCCTACACGCTTTCGGAGGTGTGGAGTGTGTGAAGCCGGAGATTAGGACAGAAAGCGTTGATCCCATCAAACCAAAGGACAAGCTTTCTGGGAAGACGAAGAAGAATGTTGATATTGTCTCTCCTCTTCCCAACAAGGACAAGGAAAACAAGCCCAAAAACAACGAAAAGAAAACCAAAGACAAAGAGGCTCCGGTGACAACAACGGTGCTGAAGGTATTTAATCTTTGCCCGTGCCAAGGTTGCTCCCATAGGATTCGCAGGGCTGTGTTGAAGTTCAAAGGGGTTAAGGAAGTGAGTACAGATAGAGAGAAGGGGATGGTTATGGTTAAGGGCACAATGGACGTGACAGCTCTGGTGCAGAAGTTGTCAGAGAAGTTTAGGAGGAAGGTTGAGGTGGTTCCTGCCAAGAAGGAGAAGGAGAAGGAGAAAGGAAAGGAGAAGGAGAAGGATAAGGAGAAAGTAAAGGAGAAGGAGAAAGAGAAGAAGAAGAAGGAAAATGAAACTGAGAAAGAAGGTGACAAAGGAGGGAGTGGCTCCACCAAGAAGAAGAAAAAAGGTGGTAATGAAGGAGATAATGATAAGGATAACGAGGGAGATGGTAAAGGCCAGGCGAAAACTGGAAAAAATGATAGCAATTATATGGTACCTGCATGTGGTTATGGTTATGGTGAATACTACTACTACGTGGGGCAATATTATCCTGCATCAGAGATGTTCAGTGATGAAAATCCCCATGCTTGTCACATTATGTGA 897 0.4493 MGQKQAKKNDYDHKNEKARKNEETSYPTTVVLKIDMHCDECASKVIKCLHAFGGVECVKPEIRTESVDPIKPKDKLSGKTKKNVDIVSPLPNKDKENKPKNNEKKTKDKEAPVTTTVLKVFNLCPCQGCSHRIRRAVLKFKGVKEVSTDREKGMVMVKGTMDVTALVQKLSEKFRRKVEVVPAKKEKEKEKGKEKEKDKEKVKEKEKEKKKKENETEKEGDKGGSGSTKKKKKGGNEGDNDKDNEGDGKGQAKTGKNDSNYMVPACGYGYGEYYYYVGQYYPASEMFSDENPHACHIM* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0355 298 Coils Coil 185 222 - -
Vra4g0355 298 Pfam Heavy-metal-associated domain 126 176 IPR006121 GO:0046872
Vra4g0355 298 MobiDBLite consensus disorder prediction 180 252 - -
Vra4g0355 298 MobiDBLite consensus disorder prediction 68 111 - -
Vra4g0355 298 CDD HMA 126 172 IPR006121 GO:0046872
Vra4g0355 298 MobiDBLite consensus disorder prediction 1 23 - -
Vra4g0355 298 MobiDBLite consensus disorder prediction 180 261 - -
Vra4g0355 298 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 6 298 - -
Vra4g0355 298 MobiDBLite consensus disorder prediction 1 24 - -
Vra4g0355 298 SUPERFAMILY HMA, heavy metal-associated domain 27 66 IPR036163 GO:0046872
Vra4g0355 298 MobiDBLite consensus disorder prediction 88 111 - -
Vra4g0355 298 Gene3D - 113 189 - -
Vra4g0355 298 Gene3D - 25 94 - -
Vra4g0355 298 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 6 298 IPR044594 GO:0046872
Vra4g0355 298 SUPERFAMILY HMA, heavy metal-associated domain 114 172 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0355 Vra-Chr4 6375334 6376674 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0355 - - vra:111241509 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0355 4 6375334 6376674 Vra2g0763 2 6766609 6768286 PCT