Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0763 ATGGGCGCGAAGAAGAAGTCAGGTGGTGGAAATGGCAACAAGGAGAACGAGGACGGCACCACAACCGTCGTTTTGAAGATCGACTTCCACTGCGACGGTTGCGCTTCCAAAATCACTCGCCACCTCCGTTCTCTCCAAGGTGTGGAGACGGTGCAGGCGGAGAGCGACGCCGGGAAGGTAACGGTGACCGGGAAACTTGACCCCGTGAAGGTGAGGGACAACCTGGCGGAGAAGATGAAGAAGAAGGTGGAAATCGTGTCTCCGCAGCCGAAGAAGGAAAAGGAGGAGAATAAAGACGCCAAAGCCAACAACAAAACCGAGGACAAGAAAAACAAGGACAAAGAGGTGACTACCGCGGTTCTGAAGATGGCACTGCATTGCCAGGGTTGCTTGGACAGGATTGGCAAGACTGTGCTGAAAACCAAAGGAGTGAAAGAGATGGCTATAGACAAGGAAAAGGAAACGGTGACTGTGAAAGGGACAATGGATGTTAAGGCTCTGGCGGAGAATCTAATGGAGAAGCTGAGGAGGCAGGTTTTGGTGGTCCCTCCGAAGAAAGAGAAGGATGGTGACAAGGAAGGAGAAAAGGACAAGGAAGGATCGGGGAAGAAGAAGAAGGGTGGTGGTGGTGGTGGTGGAGAAGGAGACAGTAACGAAGGGGTAATAGAGAAAATAGATTACAGCAGAATGGAGTATTTGCCACAACCTGCTTTTGGCTTTGGTTATGGTTATGGACACGGAAATAGTGGTGGTTATAGCTATGTGCCAGTGTACCCGGAGCAGATGCACTTTCACATGCATGCACCACCACCACAAATTTTCAGTGACGAGAACCCGAATGCCTGTTCTGTCATGTGA 858 0.507 MGAKKKSGGGNGNKENEDGTTTVVLKIDFHCDGCASKITRHLRSLQGVETVQAESDAGKVTVTGKLDPVKVRDNLAEKMKKKVEIVSPQPKKEKEENKDAKANNKTEDKKNKDKEVTTAVLKMALHCQGCLDRIGKTVLKTKGVKEMAIDKEKETVTVKGTMDVKALAENLMEKLRRQVLVVPPKKEKDGDKEGEKDKEGSGKKKKGGGGGGGEGDSNEGVIEKIDYSRMEYLPQPAFGFGYGYGHGNSGGYSYVPVYPEQMHFHMHAPPPQIFSDENPNACSVM* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0763 285 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 5 285 - -
Vra2g0763 285 SUPERFAMILY HMA, heavy metal-associated domain 117 171 IPR036163 GO:0046872
Vra2g0763 285 CDD HMA 125 169 IPR006121 GO:0046872
Vra2g0763 285 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 5 285 IPR044594 GO:0046872
Vra2g0763 285 MobiDBLite consensus disorder prediction 80 113 - -
Vra2g0763 285 Gene3D - 20 94 - -
Vra2g0763 285 Gene3D - 116 188 - -
Vra2g0763 285 CDD HMA 30 84 IPR006121 GO:0046872
Vra2g0763 285 SUPERFAMILY HMA, heavy metal-associated domain 18 86 IPR036163 GO:0046872
Vra2g0763 285 Coils Coil 92 112 - -
Vra2g0763 285 MobiDBLite consensus disorder prediction 178 219 - -
Vra2g0763 285 Pfam Heavy-metal-associated domain 27 82 IPR006121 GO:0046872
Vra2g0763 285 Pfam Heavy-metal-associated domain 124 173 IPR006121 GO:0046872
Vra2g0763 285 MobiDBLite consensus disorder prediction 179 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0763 Vra-Chr2 6766609 6768286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0763 - - pvu:PHAVU_011G084200g 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0763 2 6766609 6768286 Vra2g0763 2 6766609 6768286 ECH
Vra4g0355 4 6375334 6376674 Vra2g0763 2 6766609 6768286 PCT