Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0326 ATGTTTTGGAAGCTTGCATCTCTCTCTGCTTCCTCCCCCGTGGAGGCAATATTAGACAAGGATAATTTCACTTTGGAAGAGCTTCTGGATGAAGAGGAAGTGATCCAAGAATGCAAGGCCTTAAACAGTCGCCTTATCAACTTTTTGAGAGATCAGACCCAGGTTGAGCAATTGTTACGGTACATTATTGAAGAACCACCTGAAGATGCTGAAAATAAACGAGCCTTCAAGTTTCCATTCATTGCCTGCGAGATTTTTACATGTGAAATTGATGTCATTTTGAAGACCTTGGTTGATGACGAAGAGCTGATGAACTTATTATTCTCCTTTTTGGAGCCTAATCGCTCACATAGTGCCTTGTTAGCAGGCTACTTTAGTAAGGTTGTTGTTTGCCTAATGATTCGAAAGACAGTTCCACTGATGAATTATGTTCAAGTCCATCAGAATGTTTTCCGTCAACTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGTGCTGATGATCATATGTATCACAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACTTGCTTGAGATGATTATTGATAAATTGAGTCCATCTTGTCCTCCCGAAGTTCATGCCAACGCTGCTGAAACACTGTGCACAATAACTAGAAATCCGTCATCTACTCTAGCAATTAAACTTTCAAGTCCAAGTTATGTTGAAAAACTATTTGATCACGCACTGGAAGATTCACAGTCAAAGTCTAGCCTTGTGAATTCACTTTCAGTGTGTGTTTCTTTGTTGGATCCCAAAAGATCTGCTATATCATCTCCCCTTTTTCATTCCTTTCGAAGTCAACACATGTATGAGCCACCAATTCCTGTAAACCCCGACACTATTGGTGCAATGCTACCAAAACTTGGTGAATTGCTTATGCTTCTGAATGTATCATCCGATGAAAAAGTTTTGCCCACAACATATGGAGAACTGAGACCTCCACTTGGGAAGCATCGATTGAAGATTGTTGAGTTCATTGCCGTCCTTCTGAAAACCGGAAATGAAGTGGCAGAAAAAGACATGGTCAATTCAGGAACTATTCAACGAGTCATTGACCTTTTCTTTGAGTATCCATATAATAACTCATTACACCATCATGTAGAAAGTATCGTATTATCATGTTTGGAGAGTAAAGCTGATTCCATTGTTGATCATCTTCTTCGGGAGTGTAACTTAATTGGAAGATTTCTCCAAGCAGATAAACATTCTATTCTATCTGCTGACAAAAATACGCCAACTGTACTTGCTGCTGGAAAACAGGCACCACGGGCAGGGAACATTGGGCATATTACTCGTATTGCTAACAAACTTGTTCACCTGGCACATAGTCGAAGCCTCATACTAACATGTCTTCAGGAAAATAGTGAGTGGAGTGATTGGCAAACATCAGTTCTTCAGGAGCGTAACGTGGTTGAGAATGTTCACCGTTGGGCTTGTGGACGTCCGACTGCTTTGCAAGATAGGATGAGGGATAGTGATGACGATGACCTTCATGACAGGGACTATGATGTTGCGGCTTTAGCAAATAATTTGAGCCAGGCTTTTAGATACAAAATTTATGGGAATGAAGATAATGAGGAGGAACGTGGCAACGGTGATAGAGAGGATGAGGATGTCTACTTTGATGATGACTCTGCTCAGGTAGTCATATCAAACCTCAGACTCAGTGATGATCAAGGGAGTAGTCTTTTCACAAACTCCAACTGGTTTGCATTCCAAGATGACAGAATTGGTGATGCAACTGATGGCACAACATCATCTGAGATGATGGATGAGATAAACATGAATGGTGCTGCAAATGGTGGTAACAGTAGTGATGATGAGGTAGTGGTTGGAGAGGATGAAGAATTGGCTGAAAGCACCAATAATCTCAATAGTACATCTAACTCAAGCACAAACTTAAACGGGGTAACTGGTAGTGATTCCATGAATGGGGACGCCTTGAACTTCGAAATCAAAAAGGCAAGTGCTTCACATGATATGGGTTTCTTCAGGTTTGAGTCGGACAATGAAGAATTGTTTGGGGACAGGCCTTTGCCAGAGTGGGTGGGATGGGGTGAGCCTTTAGATGTGCAAGATGCTGGCTCAAGCACGAATCCATTTGTGGACCATGATTCTTCTGGTAACAACCTTTCTACCAAAGCTCAAATAGGTAACCTAAATCCTAGTCCTCCAAATGGGGACTCTGTTCCTTCAAACAGGTCACCAACCCTTAAAGATTCAATTGATGGGAGTATTGACTCGAGTCAAAGATCAATAGCAGTACCATCACTCTTTGAAGAAGATGTTGAATTTGTAGGTGTAGAATTAGAAGGTACTGAGAAGGCTATGGAACAGGCTTTGAAAGAAGGGATAGTTGGAGAGGCAGGACCATTGAAAAGAAACATGGTTTCTAAAGTGCCAGAAAAAGAAAGTTCTGATGAGGGTGGTCCTGGAATAAAGGAATTCAACGATGCAAATTACTGGAGGGTTGACCAAGAAGTTGCTGTTCTGGAGTGA 2550 0.4133 MFWKLASLSASSPVEAILDKDNFTLEELLDEEEVIQECKALNSRLINFLRDQTQVEQLLRYIIEEPPEDAENKRAFKFPFIACEIFTCEIDVILKTLVDDEELMNLLFSFLEPNRSHSALLAGYFSKVVVCLMIRKTVPLMNYVQVHQNVFRQLVDLIGITSIMEVLVRLVGADDHMYHNFIDVMQWLAESNLLEMIIDKLSPSCPPEVHANAAETLCTITRNPSSTLAIKLSSPSYVEKLFDHALEDSQSKSSLVNSLSVCVSLLDPKRSAISSPLFHSFRSQHMYEPPIPVNPDTIGAMLPKLGELLMLLNVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEVAEKDMVNSGTIQRVIDLFFEYPYNNSLHHHVESIVLSCLESKADSIVDHLLRECNLIGRFLQADKHSILSADKNTPTVLAAGKQAPRAGNIGHITRIANKLVHLAHSRSLILTCLQENSEWSDWQTSVLQERNVVENVHRWACGRPTALQDRMRDSDDDDLHDRDYDVAALANNLSQAFRYKIYGNEDNEEERGNGDREDEDVYFDDDSAQVVISNLRLSDDQGSSLFTNSNWFAFQDDRIGDATDGTTSSEMMDEINMNGAANGGNSSDDEVVVGEDEELAESTNNLNSTSNSSTNLNGVTGSDSMNGDALNFEIKKASASHDMGFFRFESDNEELFGDRPLPEWVGWGEPLDVQDAGSSTNPFVDHDSSGNNLSTKAQIGNLNPSPPNGDSVPSNRSPTLKDSIDGSIDSSQRSIAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNMVSKVPEKESSDEGGPGIKEFNDANYWRVDQEVAVLE* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0326 849 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 2-LIKE ISOFORM X1 1 847 - -
Vra4g0326 849 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 847 IPR007587 GO:0019903|GO:0043666
Vra4g0326 849 MobiDBLite consensus disorder prediction 632 657 - -
Vra4g0326 849 MobiDBLite consensus disorder prediction 635 657 - -
Vra4g0326 849 MobiDBLite consensus disorder prediction 709 765 - -
Vra4g0326 849 MobiDBLite consensus disorder prediction 702 765 - -
Vra4g0326 849 MobiDBLite consensus disorder prediction 814 828 - -
Vra4g0326 849 MobiDBLite consensus disorder prediction 813 835 - -
Vra4g0326 849 Pfam SIT4 phosphatase-associated protein 358 490 IPR007587 GO:0019903|GO:0043666
Vra4g0326 849 Pfam SIT4 phosphatase-associated protein 131 356 IPR007587 GO:0019903|GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0326 Vra-Chr4 5975310 5984231 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0326 K15501 - gmx:100777597 1449.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0326 4 5975310 5984231 Vra4g0326 4 5975310 5984231 ECH
Vra4g0326 4 5975310 5984231 Vra2g0729 2 6247632 6259240 PCT