Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0729 ATGTTCTGGAAGCTCGCCTCTATCTCCTCCTCCTCTCCTGTGGAGGTAATATTGGACAAGGAGAACTTCACTTTGGAAGAACTTCTGGATGAGGAGGAAATAATCCAAGAATGCAAGGCCTTAAACAGTCGACTCATCAACTTTCTGAGAGATAGAACTCAGGTGGAGCAATTGCTACGCTACATCATTGAAGAACCACCTGAGGATGCCGAAAACAAACGGGTCTTCAAGTTCCCATTCATCGCCTGTGAGATCTTTACGTGTGAAATTGATGTAATTTTGAAGACCTTGGTGGATGAAGAAGAGCTCATGAACTTATTATTTTCCTTCTTGGCACCTGATCGTTCTCATAGTACCTTGCTTGCTGGTTACTTTAGCAAGGTCGTTATTTGTCTAATGATACGAAAGACAGTACCGCTTATGAATTATGTTCAAGCCCATCAGCATGTTTTCCGCCAACTTGTAGATTTGATAGGCATTACATCTATTATGGAGGTTTTGGTTCGACTAGTAGGTGCTGATGACCACGTATATCCCAATTTTATAGATGTGATGAAATGGTTGGCTGAGAGCAACCTACTTGAGATGATTGTTGATAAATTAAGTCCAGCTAGTCCTCCCGAAGTTCATGTCAATGTTGCTGAAACTTTGTGTACCATAACTCGGGTTGCATCATCTTCTACTCTAGCAATGAAGCTTTCAAGTCCAAGTTTTGTTGCAAAAATTTTGGGTTATGCATTGGAGGATTCACATTCGAAGTCTAGCCTTGTCAACTCACTTTCAGTGTGTATTTCTTTGTTGGATCCCAAAAGATCAGCTATTCCGTCTCCGTTTTTTCATTCATTCCGAAGTCAAAACATGTATGAACCACCAATTCCTGTCAACCCAGATACCATTGGTGCAATGCTACCTAAACTTGGTGAACTGCTTGTGCTTTTGGACGTGTCATCCGACAATAAAGTATTGCCTACGACGTATGGTGAATTGAGACCTCCACTTGGCAAGCATCGATTAAAGATTGTGGAGTTTATTGCTGTACTTTTGAAAACTGGAAATGAAGTGGCAGAAAAAGAATTGGCAAACTCAGGAACCATTCGACGAGTCATTGATCTTTTCTTTGAGTATCCATACAATAACTCATTACACCATCACATAGAAAGCATCATATCATCATGTCTGGAGAGCAAATCTAATGCCATCATTGATCATGTGCTCCGAGATTGTGATTTAGTTGGAAGGTTTATCCAAGCAGATAAAAATTCTATTCTTTCTGCTGAAAGCAATCAGCCCACGGTACCTGCTGCAGGAAAACGGGGAACACGAATAGGAAACATTGGACATATTACTCGAATTTTCAACAAACTTGTTCACTTGGCCCATAACCAAAGCCACATTGTGAAATGTCTCCAGGAGAATAGTGAGTGGAATGAGTGGCAAGCTACTGTTCTTCAGCAGCGTAATGTGGTTGAGAATGTTCACCGTTGGGCTTGTGGACGCCCAACTGCATTACAAGATAGAATGAGGGATAGTGATGATGAAGACCTTCATGACAGAGACTATGATGTTGCAGCTTTAGCAAATAATTTGAGCCAGGCTTTTAGATACAAAATTTATGGAAATGAAGATAATGAAGAGGAACATGGTGTTCTTGATCGAGATGACGAGGTAGATGTCTACTTTGACGATGATTCTGCTGAAGTAGTCATATCATCCCTAAGACTTGGTGATGATCAAGGGAGTAACCTGTTTACAAACTCCAACTGGTTTGCGTTCCAAGATGACAGAATTGGTGATGCACCTGGTGGCACATCATCCTCTGAGATGATGGATGAGATAAAATTGAACTCAGCTTCAAATGGTGGTAGCAACAGTAGTGATGACGAGGTAGTGGTTGGAGAGGATGAAGAATTGGCCGACAGCAAAAACACTGTGAATGGTACATCTAGCTCAAGCACGAACTTCTTTAGTGGATTAACTGGTAGTGATTCCATGAATGGGGGCACCTTAGACTTTGAAAGTGAGAAGACAAGTCCTTCACATGATATGGGATTCTTCAGGTTTGAGGCACCAGACAATGAGGACTTGTTTGGGGATAGATCTTTACCTGATTGGGTGGGATGGGGTGAACCATCAGATATGCAAAGTTCTGGCTCGAGTAGGAATCCCTTTCTGGATCATGACGACTCTGGTAGTAATTTTCCTATCAAGCCTCAGGTAGACAGTCTTGTTCTGAATTCTCCTTCAAATGGGGAATCTGTACCTCCTTCGAATGGATCGCCAACTACTACAGATTCAAGTAATGGGAGCATTGACTCCAGTCCAACAACAGTAGCGGTACCCTCGCTATTTGAAGAGGATGTGGAATTTGTAGGTGTGGAATTAGATGGTACCGAGAAGGCAATGGAACAGGCTTTAAAAGAAGGCACAGTTGGCGAAGCCGGACCATTGAAAAGAAACGTAGTGTCAAAGGTTCCAGAAAAGGAAAATTCTGAAGAAGACGGCAGTCATGCTGTGAAGGACTTCAACGATGCAAATTACTGGAGGGTCGACAAAGAGGTTGCTGTTCTAGAGTGA 2574 0.4215 MFWKLASISSSSPVEVILDKENFTLEELLDEEEIIQECKALNSRLINFLRDRTQVEQLLRYIIEEPPEDAENKRVFKFPFIACEIFTCEIDVILKTLVDEEELMNLLFSFLAPDRSHSTLLAGYFSKVVICLMIRKTVPLMNYVQAHQHVFRQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVMKWLAESNLLEMIVDKLSPASPPEVHVNVAETLCTITRVASSSTLAMKLSSPSFVAKILGYALEDSHSKSSLVNSLSVCISLLDPKRSAIPSPFFHSFRSQNMYEPPIPVNPDTIGAMLPKLGELLVLLDVSSDNKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEVAEKELANSGTIRRVIDLFFEYPYNNSLHHHIESIISSCLESKSNAIIDHVLRDCDLVGRFIQADKNSILSAESNQPTVPAAGKRGTRIGNIGHITRIFNKLVHLAHNQSHIVKCLQENSEWNEWQATVLQQRNVVENVHRWACGRPTALQDRMRDSDDEDLHDRDYDVAALANNLSQAFRYKIYGNEDNEEEHGVLDRDDEVDVYFDDDSAEVVISSLRLGDDQGSNLFTNSNWFAFQDDRIGDAPGGTSSSEMMDEIKLNSASNGGSNSSDDEVVVGEDEELADSKNTVNGTSSSSTNFFSGLTGSDSMNGGTLDFESEKTSPSHDMGFFRFEAPDNEDLFGDRSLPDWVGWGEPSDMQSSGSSRNPFLDHDDSGSNFPIKPQVDSLVLNSPSNGESVPPSNGSPTTTDSSNGSIDSSPTTVAVPSLFEEDVEFVGVELDGTEKAMEQALKEGTVGEAGPLKRNVVSKVPEKENSEEDGSHAVKDFNDANYWRVDKEVAVLE* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0729 857 MobiDBLite consensus disorder prediction 614 686 - -
Vra2g0729 857 MobiDBLite consensus disorder prediction 700 778 - -
Vra2g0729 857 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 855 IPR007587 GO:0019903|GO:0043666
Vra2g0729 857 MobiDBLite consensus disorder prediction 734 778 - -
Vra2g0729 857 MobiDBLite consensus disorder prediction 711 726 - -
Vra2g0729 857 MobiDBLite consensus disorder prediction 641 673 - -
Vra2g0729 857 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 2-LIKE ISOFORM X1 1 855 - -
Vra2g0729 857 Pfam SIT4 phosphatase-associated protein 358 491 IPR007587 GO:0019903|GO:0043666
Vra2g0729 857 Pfam SIT4 phosphatase-associated protein 131 358 IPR007587 GO:0019903|GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0729 Vra-Chr2 6247632 6259240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0729 K15501 - gmx:100805409 1494.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0729 2 6247632 6259240 Vra2g0729 2 6247632 6259240 ECH
Vra4g0326 4 5975310 5984231 Vra2g0729 2 6247632 6259240 PCT