Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0323 ATGAGCGAGACGAGTTCATCGGCGCATGACCCCGAGCCTCCTATCCGGCTCAACCTGCCTCCCCTCTCACCGAGCCTCTTCGACGCGGAACCATCGGAGCTCCAACAACCCAATGGATCCGCCGTCCGAAACTCCTCTGATCCCTCTAGCCCTACTAGCAGCGGTTACGCCGCCGAGCAGGGTAGAAGCACCGCCACAATTGTCTCCCAGGTCGATGAGGTCCTTCATAACGAAATTCAGGAGATCACCATCGACGATCCCCAACCTCTCTCTCACTCCTCCCGACTTCCCGGAAAACGACACAGCGATGAGGATGATGCTTCCATTTCATGGAGGAGAAGGAAGAAGCATTTTTTTGTTCTCAGTCATTCTGGCAAACCAATATATTCTAGGTACGGAGATGAACACAAGCTTGCTGGTTTTTCGGCAACTTTGCAAGCAATCATTTCCTTTGTGGAAAATGGGGGTGATCATGTGAAATTGGTTAGGGCTGGAAAGCATCAGGTGGTTTTTCTTGTAAAAGGACCAATTTACTTGGTCTGCATCAGCTGCACGGAAGAACCCTATGAGTCACTAAGGGGACAGTTGGAGCTTTTTCATGGCCAGATTATTGTTATACTAACAAAGTCAGTAAACAGATGTTTTGAGAAGAATCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACAGACCTTGTTTTCTCTTCACTAGTCCACTCTTTTAATTGGAACCCAGCTACATTTCTTCATGCCTATACTTGTCTGCCTCTTGCATATGCAACAAGGCAAGCTGCTAGTGCCATCTTGCAAGACGTTACTGATTCTGGTGTTCTGTTTGCAATTCTGATGTGCAGACATAAGGTAATCAGTCTAGTTGGTGCTCAAAAAGCCTCTCTTCATCCAGATGATATGCTGCTCTTGGCCAACTTTGTTATGTCATCTGAGTCCTTTAGGACTTCAGAAGCATTTTCTCCTGTTTGCTTGCCACGATACAATGCTTTGGCATTTTTGTACGCTTATATCCACTTTTTTTATGATGATTTGTATTTGATGCTGCTGACCACGAGTTCTGATGCATTTTACCATCTTAAGGATTGTAGGATTAGTATTGAAACTGTCCTTGTGAAGTCAAATGTCCTCAGTGAAGCTCAGAGATCCTTGGTAGATGGTGGGATGCGTGTGGAGGATCTTCCTCCCTTACCTTATTCAGGATCTTCACATTTAGGTCAGCATAGGCTTCCATCAGATTCTCCTGAAAGATTAAGGGAACCTGATTGTGGCATTGGTGGTGCTGCTGGGTTGTGGCATTTCTTATATCGTAGCATTTATCTAGATCAATATATATCCTCAGAGTTCTCATCACCTATTAATACTCCTAAGCAGCAGAAAAGATTGTATAGAGCTTACCAAAAACTTTTTACATCCATGCATGATAAAGGACTTGGGCCACACAAAACCCAGTTTAGAAGGGATGAAAACTACGTACTGCTTTGTTGGGTAACACAGGATTTTGAGCTTTATGCTGCATTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAGACTTGCAATCGGGTGTGTCAATGGGTAAAAGATGTGGAAAATGAAATATTTTTGCTAGGAGTTAGTCCCTTTTCGTGGTGA 1644 0.444 MSETSSSAHDPEPPIRLNLPPLSPSLFDAEPSELQQPNGSAVRNSSDPSSPTSSGYAAEQGRSTATIVSQVDEVLHNEIQEITIDDPQPLSHSSRLPGKRHSDEDDASISWRRRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDHVKLVRAGKHQVVFLVKGPIYLVCISCTEEPYESLRGQLELFHGQIIVILTKSVNRCFEKNPKFDMTPLLGGTDLVFSSLVHSFNWNPATFLHAYTCLPLAYATRQAASAILQDVTDSGVLFAILMCRHKVISLVGAQKASLHPDDMLLLANFVMSSESFRTSEAFSPVCLPRYNALAFLYAYIHFFYDDLYLMLLTTSSDAFYHLKDCRISIETVLVKSNVLSEAQRSLVDGGMRVEDLPPLPYSGSSHLGQHRLPSDSPERLREPDCGIGGAAGLWHFLYRSIYLDQYISSEFSSPINTPKQQKRLYRAYQKLFTSMHDKGLGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWVKDVENEIFLLGVSPFSW* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0323 547 PANTHER SAND PROTEIN-RELATED 44 547 IPR004353 GO:0006623
Vra4g0323 547 MobiDBLite consensus disorder prediction 1 62 - -
Vra4g0323 547 PANTHER BNAC04G15860D PROTEIN 44 547 - -
Vra4g0323 547 Pfam Second Longin domain of FUZ, MON1 and HPS1 277 367 IPR043971 GO:0016192
Vra4g0323 547 MobiDBLite consensus disorder prediction 81 107 - -
Vra4g0323 547 Pfam Third Longin domain of FUZ, MON1 and HPS1 433 533 IPR043970 GO:0016192
Vra4g0323 547 Pfam First Longin domain of FUZ, MON1 and HPS1 116 236 IPR043972 GO:0016192
Vra4g0323 547 MobiDBLite consensus disorder prediction 29 62 - -
Vra4g0323 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 116 133 IPR004353 GO:0006623
Vra4g0323 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 134 154 IPR004353 GO:0006623
Vra4g0323 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 168 182 IPR004353 GO:0006623
Vra4g0323 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 219 231 IPR004353 GO:0006623
Vra4g0323 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 248 269 IPR004353 GO:0006623
Vra4g0323 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 272 285 IPR004353 GO:0006623
Vra4g0323 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 296 312 IPR004353 GO:0006623
Vra4g0323 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 321 344 IPR004353 GO:0006623
Vra4g0323 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 349 375 IPR004353 GO:0006623
Vra4g0323 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 496 510 IPR004353 GO:0006623
Vra4g0323 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 512 525 IPR004353 GO:0006623
Vra4g0323 547 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 525 545 IPR004353 GO:0006623
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0323 Vra-Chr4 5929382 5935400 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0323 K20195 - gmx:100816794 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0323 4 5929382 5935400 Vra4g0323 4 5929382 5935400 ECH
Vra4g0323 4 5929382 5935400 Vra2g0725 2 6204336 6208919 PCT