Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0725 ATGAACGACGACGAAACAGAGTCCGATGGAGAGATTAGGGCTTCCGTCGAACCCGTTTCGGAGGACGCTCCATCCAGCCCCGGTAGCAGCGGGTACGTCGGCGAAGGAGGCAGCACCAGCGCAACCACTGGTTCGCAATTCGAAATTGAGCACGAAGAAATAGAAGAGGACACGACGATTGATATGGACAGAATCTCGATTTCCGACTCCCACGCGTCGTGGATTCCCGGCAAACGGCACTTCGACGAGGATGATGGCTCCATATCATGGAGGAAGAGGAAGAAACATTTTTTCGTTCTCAGTCATTCCGGCAAACCTATATATTCCAGGTATGGAGATGAACACAGACTTGCAGGGTTTTCAGCAACTTTGCAAGCAATCATTTCCTTTGTTGAGAACGGGGGCGACTCTGTCAAATTGGTGAGGGCTGGGAGGCATCAGGTGATTTTTCTAGTGAAAGGACCAATTTACCTAGTCTGCATCAGCTCCACAGAAGAACCTTACGCGTCATTAAGGGGGCAGTTAGAGCTAATTTATGGTCAGATGCTTGTTATACTAACAAAATCAATAAATAGATGTTTTGAGAAGAACCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACAGAAATTGTCTTCTCTTCTCTAATACACTCTTTCAGCTGGAACCCAGCCACATTTCTTCATGCGTATACTTGTCTCCCTCTTGCATATGCAACTAGGCAAGCTGCAGGAGCTATTTTGCAAGATGTTGCTGATACGGGTGTTTTGTTTGCAATACTTATGTGCAGGCACAAGGTAATCAGTCTCGTTGGTGCTCAGAAAGCTTCCCTTCATCCAGATGATATACTGCTTTTGGCCAACTTTGTCATGTCATCTGAATCCTTCAGGACATCAGAATCATTTTCTCCAATTTGCTTGCCAAGATATAACCCTTCAGCATTTTTGTATTCATATATCCATTACTTCGATGCTGACACATACTTGGTGTTACTATCCACTAATTCTGATGCATTTTATCATCTTAAGGATTGCAGGATTCGTGTTGAAAATGTTCTTTTGAAGTCATGTGTCCTTAGTGAAGTTCAGAGATCCTTGTTAAACGGGGGAATGCATGTTGAAGATCTGCCACCTATATCTCATTCCGGATCATCTCATTTGGGCCAGCACATGCTTCCATCAGATTCTCCTGACAGATTTAGGGAAGCTAATTCTGGCATTGGGGGTCCTGCTGGGTTGTGGCATTTCATATACCGCAGTATATATCTTGACCAGTATGTCTCCTCGGAGTTCCCACCATCAATCAATACGCCTCAGCTGCAAAAAAGACTGTATAGAGCTTACGAGAAACTTTTTGCATCCATGCACGATAAAGGAATTGGGCCACACAAAACTCAATTTAGGAGAGATGAAAACTACGTTCTTCTCTGTTGGGTGACACAGGATTTTGAGCTCTATGCTGCCTTTGATCCCCTTGCAGACAAGGCCTTGGCAATCAAGACGTGCAACCATGTTTGTCAGTGGATAAAAGATGTGGAAAATGAAATATTTTTGCTAGGAGCTAGCCCCTTTTCATGGTGA 1581 0.444 MNDDETESDGEIRASVEPVSEDAPSSPGSSGYVGEGGSTSATTGSQFEIEHEEIEEDTTIDMDRISISDSHASWIPGKRHFDEDDGSISWRKRKKHFFVLSHSGKPIYSRYGDEHRLAGFSATLQAIISFVENGGDSVKLVRAGRHQVIFLVKGPIYLVCISSTEEPYASLRGQLELIYGQMLVILTKSINRCFEKNPKFDMTPLLGGTEIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDVADTGVLFAILMCRHKVISLVGAQKASLHPDDILLLANFVMSSESFRTSESFSPICLPRYNPSAFLYSYIHYFDADTYLVLLSTNSDAFYHLKDCRIRVENVLLKSCVLSEVQRSLLNGGMHVEDLPPISHSGSSHLGQHMLPSDSPDRFREANSGIGGPAGLWHFIYRSIYLDQYVSSEFPPSINTPQLQKRLYRAYEKLFASMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNHVCQWIKDVENEIFLLGASPFSW* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0725 526 PANTHER BNAC04G15860D PROTEIN 14 526 - -
Vra2g0725 526 PANTHER SAND PROTEIN-RELATED 14 526 IPR004353 GO:0006623
Vra2g0725 526 MobiDBLite consensus disorder prediction 1 58 - -
Vra2g0725 526 Pfam Third Longin domain of FUZ, MON1 and HPS1 412 513 IPR043970 GO:0016192
Vra2g0725 526 Pfam First Longin domain of FUZ, MON1 and HPS1 95 216 IPR043972 GO:0016192
Vra2g0725 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 95 112 IPR004353 GO:0006623
Vra2g0725 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 113 133 IPR004353 GO:0006623
Vra2g0725 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 147 161 IPR004353 GO:0006623
Vra2g0725 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 198 210 IPR004353 GO:0006623
Vra2g0725 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 227 248 IPR004353 GO:0006623
Vra2g0725 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 251 264 IPR004353 GO:0006623
Vra2g0725 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 275 291 IPR004353 GO:0006623
Vra2g0725 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 300 323 IPR004353 GO:0006623
Vra2g0725 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 328 354 IPR004353 GO:0006623
Vra2g0725 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 475 489 IPR004353 GO:0006623
Vra2g0725 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 491 504 IPR004353 GO:0006623
Vra2g0725 526 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 504 524 IPR004353 GO:0006623
Vra2g0725 526 Pfam Second Longin domain of FUZ, MON1 and HPS1 255 348 IPR043971 GO:0016192
Vra2g0725 526 MobiDBLite consensus disorder prediction 22 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0725 Vra-Chr2 6204336 6208919 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0725 K20195 - gmx:100814534 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0725 2 6204336 6208919 Vra2g0725 2 6204336 6208919 ECH
Vra4g0323 4 5929382 5935400 Vra2g0725 2 6204336 6208919 PCT