Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0279 ATGTTGTCCATTTTTCGTCAATACACCTTCGACGACTCCTTCGAACAAGTCTTCGTCTCGAACAAGTTCCTGAAGGAGTACCAGATCGCACTCACCTTCGCCACCGACTACGACGAGGACGACCACCCCACCAACGGCATCTTCCGCCCCACCTGGGACCTCCAGAAGGTGACACCGGAAGCCATCGAGCTGTTCAAGGAGAAGGGCCGCAGCATGGACGTGGACGTGAAAGTGTTCATCTCCATCGGCAACCGCGGCACCCACCAGCCCTTCAAACCCCTCGACAACAAAACATGGATCGCCAACGCCACCCAGTCCCTCACAAACCTCATCCAGTGCAAGGAGCTGAACCTCCACGTGGACGGCATTGACGTGCTGTATGAGCAAATCGATGCCTCCCCCGGTGACTTTATCCAGTGCGTGGGACAGCTGATAAAGAACCTCAAGGAGAATGGGGTAATCACCGAAGCTTCGATTTCCCCCACGTTTAACCTTAACAAGGAGTTCTACTCTCGTTTGTACAATGCTGTGTCGTCATTGGTTGATTTTGTGGATTACCAGTTCCAGAAGGAGGTTGATTTTGTTATGAATCCCGGTGTGCTGTTGCAGAGGTACAACGAACTCACCAAGGTTTATCCGAGAAGGAAGCTGTTGGCTGGGTACAGCGCAGAGAACGAGGACTGGACCACTCTTTCACCCATCGTCTTCTTCCTTGGTGGCATGGACATTCTCAAGAAGAGAAAGGCTCCTGGAATTTCCATTCATTACCATAATTTCTATGCTCAATCTTCTCCTCAACAATGA 804 0.5124 MLSIFRQYTFDDSFEQVFVSNKFLKEYQIALTFATDYDEDDHPTNGIFRPTWDLQKVTPEAIELFKEKGRSMDVDVKVFISIGNRGTHQPFKPLDNKTWIANATQSLTNLIQCKELNLHVDGIDVLYEQIDASPGDFIQCVGQLIKNLKENGVITEASISPTFNLNKEFYSRLYNAVSSLVDFVDYQFQKEVDFVMNPGVLLQRYNELTKVYPRRKLLAGYSAENEDWTTLSPIVFFLGGMDILKKRKAPGISIHYHNFYAQSSPQQ* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0279 267 Pfam Glycosyl hydrolases family 18 62 232 IPR001223 GO:0005975
Vra4g0279 267 Gene3D Glycosidases 3 266 - -
Vra4g0279 267 PANTHER RUBISCO-ASSOCIATED PROTEIN 1 265 - -
Vra4g0279 267 SUPERFAMILY (Trans)glycosidases 28 255 IPR017853 -
Vra4g0279 267 PANTHER CHITINASE 2-LIKE 1 265 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0279 - - pvu:PHAVU_005G139200g 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0279 4 5422628 5423563 Vra4g0279 4 5422628 5423563 ECH
Vra4g0279 4 5422628 5423563 Vra2g0656 2 5318823 5319780 PCT