Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0656 ATGAAAATTTCCATCACTTTGTTCTTGGTGTTCGTGTTACTCACATCAACCCATGCAGAAACAATGTCCACCCCAACTTCAAACCTATTCCGAGAATACATAGGAGCGGAGTTCAACAACGTTAAATTCTCCGATGTTCCCATCAACCCAAATGTCCAGTTCCACTTCATTCTCTCCTTCGCCATTGACTATGACACCTCATCAACCTCTTCTCCAACCAACGGAAAATTCAACGTCTTCTGGGACACCGACAACCTTAACCCTACCCAAGTCTCAGCGGTGAAGGCGAAAAACTCAAACGTCAAAGTAGCCCTGAGTCTCGGAGGAGACAGCGTCGGAGGAGGCTACGCTTACTTCAACCCCTCATCGATCGATTCCTGGGTTTCCAACGCCGTTTCAACACTCACAACCATAATCAAAGAGTACAACTTGGACGGAATCGACATCGACTACGAGCACTTCAAAACGGACCCTGAAACGTTCTCGGAGTGTGTGGGGAGGCTGATCAAGACGCTGAAATCGAACGGGGTGATAGAATTTGCCTCCATTGCTCCTTTTGACGATGACCAAGTTCAAAGCCACTACTTGGCATTGTGGAAGAGTTACGGGAACCTGATAGACTACGTTAACTTTCAGTTTTATGCGTACGACAAGGGCACCAGTGTGGCACAGTTCATCGACTACTTCAACACGCAGAGTTCGAATTACAAAGGTGGAAAGGTGTTGGTGAGTTTCATCAGTGATGGAAGTGGCGGCTTGGCCCCGAATGATGGCTTCTTTACAGCATGTCACAAGCTAAAGACTCGGCAAAACCTTCATGGTATCTTTGTCTGGTCGGCTGATGACTCCATGGGAAATGATTTTCGTTATGAGAAGCAATCACAAGCCCTTTTGGCTTTACCCTAG 906 0.4702 MKISITLFLVFVLLTSTHAETMSTPTSNLFREYIGAEFNNVKFSDVPINPNVQFHFILSFAIDYDTSSTSSPTNGKFNVFWDTDNLNPTQVSAVKAKNSNVKVALSLGGDSVGGGYAYFNPSSIDSWVSNAVSTLTTIIKEYNLDGIDIDYEHFKTDPETFSECVGRLIKTLKSNGVIEFASIAPFDDDQVQSHYLALWKSYGNLIDYVNFQFYAYDKGTSVAQFIDYFNTQSSNYKGGKVLVSFISDGSGGLAPNDGFFTACHKLKTRQNLHGIFVWSADDSMGNDFRYEKQSQALLALP* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0656 301 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 144 152 IPR001579 GO:0004553|GO:0005975
Vra2g0656 301 PRINTS 2-S globulin family signature 27 40 IPR000677 -
Vra2g0656 301 PRINTS 2-S globulin family signature 74 89 IPR000677 -
Vra2g0656 301 PRINTS 2-S globulin family signature 91 109 IPR000677 -
Vra2g0656 301 PRINTS 2-S globulin family signature 261 280 IPR000677 -
Vra2g0656 301 PANTHER CHITINASE 2-LIKE 7 299 - -
Vra2g0656 301 Pfam Glycosyl hydrolases family 18 55 218 IPR001223 GO:0005975
Vra2g0656 301 CDD GH18_narbonin 29 283 - -
Vra2g0656 301 Gene3D Glycosidases 26 300 - -
Vra2g0656 301 PANTHER 2, PUTATIVE, EXPRESSED-RELATED 7 299 - -
Vra2g0656 301 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 295 IPR001223 GO:0005975
Vra2g0656 301 SUPERFAMILY (Trans)glycosidases 27 293 IPR017853 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0656 - - gmx:100810745 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0656 2 5318823 5319780 Vra2g0656 2 5318823 5319780 ECH
Vra4g0279 4 5422628 5423563 Vra2g0656 2 5318823 5319780 PCT