Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0247 ATGACTGAGAATAGGGCATACAGAAATCTGCTAATTGAATTTCATCCTAAAAGTTTTGTCAAGAGAAACAATGAACATCTCACTTTGCTGCTCCGTGGCCGCTTTGGAAGAAGTGTTGTGGGTCGTATCACAATTTTCTTACTTAAAGTTGCTGCTTTAGAGATCATAAGGAGGTTCTCCAAGACTAGATGTCCATGTGTATGGCGAGGCCTTCAAGCTCTACAAGTCCTGTGTTATCCACCTTTTAAATGGATTCAGAGGTGGCCACCCTTCAAGGTTTTGGTTGACAACATGCAGGTCCTATCAAGACCATTGCTAGCCCTTTCAATTGCAACATTGTTTTCTGATCAGTCAATTGCAACATTGTTTTCTGATCAGTCAATTGCAACGTTGCTTTCTATGAAATCAAAATGTAGTGATAGAAAGTCAGATTGTAGTTCAGAAGATGCAGCAGTATACTCTGAATTATCACCTTTACAAGTTGATTTGAATATAAGCCAGTGTTCGACAAATCACAATAATTTAGAATCTGAGAAGTGGTTGACTGAACTCAATCAAGAGCTTGAAAATCAAGGACTTAGTTTACCTGAAAGAATCGATGATGACGAGCTTAGGAGATTTTATGCAGCTTCTAATAATGACTTTTCTAGCTTTCTTACCTCAATAAAGAAGACCATACGATGGCGAGAGACGTACAGAATTCTTTCCTGGGAAGAACAGAAAATGTGGACAAAATTGGTCTTTTGGCATGGGTGTGACGTGGAGCGCAGACCTTGCCTAATTGTAAGGCTAGGGTCAGCCTGCAATACTTTGGCATCGGAAGATAGACCTCGATTTGCTCAGGCAGTAATATCACAGGTAGAATATGGAGTCTTGCACTTGGTTGATGCAGACAACCCTCAAATTACAGTGTTAGTGGATTGTGATGGTTTATCTCCAGTGAGAATTCCCATGCAAATGGCGAGATCTTGTTCTTCCCTTTTGCTAGACCACTTTCCCAATCGTCTTGGTTGCATGTTTGTCATACAACTGCCAACCAGTGCTCATGTTATTGCGCAGTCTTTTATTCAAGACTTGAAGCCTGCTACTAGAAACAAGGTGAAAATAGAAGGGGAAATGTTTCAGAAAGTTCTTGCGGACTATCTGCCAACACTGCCTTCATATCTTGGAGGCTCCTGCACTTGCGTGAAATGCTATACCGTTGGCCCACAGGATATGCTGCAACCTTATGTGGCTGGGACCAGCAGGAGAGACAGGGCGGAGAACACCAGTGACAGTGACAATGAGGATCCTCCAATGTTGCATCCTTCCAATGAATTAGAAGGCGGCTTATATGGTCAATATAATCAGTTGTTGAGAGCTGCTATCGTAGGTATTCTTATATTTTGGGCTTTTGTAGCCCTTGGTGCTGTAGTATTTGAACCCAGTAATCTTCACCTGCCCTGA 1446 0.4198 MTENRAYRNLLIEFHPKSFVKRNNEHLTLLLRGRFGRSVVGRITIFLLKVAALEIIRRFSKTRCPCVWRGLQALQVLCYPPFKWIQRWPPFKVLVDNMQVLSRPLLALSIATLFSDQSIATLFSDQSIATLLSMKSKCSDRKSDCSSEDAAVYSELSPLQVDLNISQCSTNHNNLESEKWLTELNQELENQGLSLPERIDDDELRRFYAASNNDFSSFLTSIKKTIRWRETYRILSWEEQKMWTKLVFWHGCDVERRPCLIVRLGSACNTLASEDRPRFAQAVISQVEYGVLHLVDADNPQITVLVDCDGLSPVRIPMQMARSCSSLLLDHFPNRLGCMFVIQLPTSAHVIAQSFIQDLKPATRNKVKIEGEMFQKVLADYLPTLPSYLGGSCTCVKCYTVGPQDMLQPYVAGTSRRDRAENTSDSDNEDPPMLHPSNELEGGLYGQYNQLLRAAIVGILIFWAFVALGAVVFEPSNLHLP* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0247 481 MobiDBLite consensus disorder prediction 418 434 - -
Vra4g0247 481 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 2 477 - -
Vra4g0247 481 MobiDBLite consensus disorder prediction 413 438 - -
Vra4g0247 481 Pfam CRAL/TRIO domain 244 391 IPR001251 -
Vra4g0247 481 CDD SEC14 237 391 IPR001251 -
Vra4g0247 481 Gene3D - 167 420 IPR036865 -
Vra4g0247 481 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 235 397 IPR001251 -
Vra4g0247 481 SMART sec14_4 241 394 IPR001251 -
Vra4g0247 481 SUPERFAMILY CRAL/TRIO domain 244 405 IPR036865 -
Vra4g0247 481 SUPERFAMILY CRAL/TRIO N-terminal domain 171 236 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0247 Vra-Chr4 5154016 5157944 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0247 - - var:108332471 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0247 4 5154016 5157944 Vra4g0247 4 5154016 5157944 ECH
Vra4g0247 4 5154016 5157944 Vra2g0618 2 4870741 4877105 PCT