Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0618 ATGCCTTCAGTTTACATGGGGGGTAGGGTGGATAATTCTACCTCGAGCATGGGAACTAATTCTAAAGAAAACAGCGTTGTCGCTGGGAAAAATACATACAAAAACCTTCTGGTTGCATCACGGCCTAAAGGTTTTGCACAAAGAAATTATGAACAACTTGTGTCATTCACCCATGGTGACTTTGGAAGCAGTGTTGTGGGTCGTGCCACTTTTTTTTTACTCAAAGTTGCTGCATTAGAGACCGTGAGGAGGTTATCCAAGAGTAAATGCCCGTGTGTATGGCGAGGCCTCCAGGGTCTACAAATCCTTGTCTATCCACCTTTCAAATGGATTCAGAGGTGGGCACCCTTCAGGGGTTTGGTGAAGAGCATGCAGGTACTATCAAGACCACTTTTAGTTCTTTCGATTGCAACAGTCTTTACCGATCAACCACAATGTAGTGATGGAACCTCAGACTGTGTTGTTGATTCTCCTGAATCTGAGGTATCTGCCGAACTATCTCCTGCACAGCCTATCTCGAATACAAGTCATTCTGAGATAGATCCTGAAGTTTTAGAATATGAAAACTGGTTGACTCTACTTAATCAAGAGTTGGAAAATCAAGGGATTAGTTTGCCAGAAAGAATCAATGATGATGAGCTCCACAGATTTTACGCAGCTTCTAATAATGACTTTTCATGCTTCCTTGCCTCAATCAAGAAGACAATACGGTGGCGGGAGAGTTATAGATTTTTTTCAGGAGAAGAGCTGGAAACTTGGTCAAATATGGTGTTCTGGCATGGATTTGATGTTTTGCACAGACCTTGCCTCGTTGTAAGGCTTGGGATAGCTTGTCGCTCTTTGGCGTCTGAAGATAGACTTCAGTTTGCTCAGGCAATTATATCACAGGTAGAATATGGAGTCTTGCACTTGGTAGATGCAGACAACCCTCAAATTGCAGTATTGGTGGACTGTGAAGGGTTATCTCCGTTGAGAATTCCCATGAAAGTGATGAGAACTTGTTCATCCATTCTGCAAGATTACTTTCCCAATCGACTTGGTTGTTTGTTTGTCATCCGACTACCAGCAATTGTTCGTGTTATTGCCCAGACTTTTATTCAGGTTCTAAAGCCAACAACTAAGAAGAAGTTGAAATTAGGGGGAGAGATATATTGGAAAGAACTTTTTGACAATTTTCCGACACCACCATCATATCTTGGAGGAAGGTGCACTTGCATGAGATGTTCTAAAATTGGCAACTGGGATATGCTGCAACCTCATTCAACTGGGACAAACATAATTGATAGGGAGCAGGATATCAGTGACAATGGGGGATTGCCATCACTGCCATCTAATGAATTAGATGCCCGCCAAGTCAGTAATTCTGACCAGCTTTTGAGAAAGGCCGTTATAAGTTTTCTCGTATTTTGGGTTTTTATAGCTCTTGGTGCTGGAATTTACGATCCTGGTAGTCTTCATTTAGCACCATAA 1470 0.4218 MPSVYMGGRVDNSTSSMGTNSKENSVVAGKNTYKNLLVASRPKGFAQRNYEQLVSFTHGDFGSSVVGRATFFLLKVAALETVRRLSKSKCPCVWRGLQGLQILVYPPFKWIQRWAPFRGLVKSMQVLSRPLLVLSIATVFTDQPQCSDGTSDCVVDSPESEVSAELSPAQPISNTSHSEIDPEVLEYENWLTLLNQELENQGISLPERINDDELHRFYAASNNDFSCFLASIKKTIRWRESYRFFSGEELETWSNMVFWHGFDVLHRPCLVVRLGIACRSLASEDRLQFAQAIISQVEYGVLHLVDADNPQIAVLVDCEGLSPLRIPMKVMRTCSSILQDYFPNRLGCLFVIRLPAIVRVIAQTFIQVLKPTTKKKLKLGGEIYWKELFDNFPTPPSYLGGRCTCMRCSKIGNWDMLQPHSTGTNIIDREQDISDNGGLPSLPSNELDARQVSNSDQLLRKAVISFLVFWVFIALGAGIYDPGSLHLAP* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0618 489 MobiDBLite consensus disorder prediction 1 24 - -
Vra2g0618 489 MobiDBLite consensus disorder prediction 8 24 - -
Vra2g0618 489 SUPERFAMILY CRAL/TRIO domain 254 406 IPR036865 -
Vra2g0618 489 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 16 484 - -
Vra2g0618 489 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 259 407 IPR001251 -
Vra2g0618 489 SMART sec14_4 251 404 IPR001251 -
Vra2g0618 489 Gene3D - 186 433 IPR036865 -
Vra2g0618 489 Pfam CRAL/TRIO domain 255 400 IPR001251 -
Vra2g0618 489 CDD SEC14 248 365 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0618 Vra-Chr2 4870741 4877105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0618 - - gmx:100814843 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0247 4 5154016 5157944 Vra2g0618 2 4870741 4877105 PCT