Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0238 ATGGGCACACGCACACCTTTGTTCCGTGATTTTAAAAAGCAAGCTTCTTTCTTCCTCAAGGAAAAATTCAAGACTGCTAGGTTAGCTCTCACTGATGTTACTCCAGCAGAACTCATGACAGAAGAAGTTACCAAAGGAAATCCATGGGCCCCAGATTCTCCAACACTTAGATCAATTTCAAGGGCTGCTTTTGAGCTTGATGATTATTGGAGGATTGTAGAGATTCTGCACAAAAGACTCCTTAAATTTGAGAAGAAGAATTGGAGGGCATCTTACAATTCTCTGATTGTGGTGGAGCACCTGTTGACTCATGGACCAGAAAGTGTTGCAGAGGAATTTCAGAGTGACAAAGATGTAATTAGTCAGATGAAAGATTTCCACTTTACTGATGCGAGTGGGTTCAATTGGGGTGTAACTGTTAGAAAAAAATCAGAACGGATTTTGAAACTCATGGAAGAAGGAACTCTCCTTAAGGAAGAAAGAAACCGTGCTCGGAATTTGTCCAGAGGAATTCAAGGTTTTGGAAGTTTCAGTCAAAGGTCAACTCATGCACAAGGAGTTCTGCATGAAAAATCATTGCCAGCCACATTTGACAGATCTAACTCTGACTTCAACAACAATCACAGCCAGGAAAACCAGTCATTTGGCTCAAACCATTTTCTGCAAACAGCAGCAGTTAAATCTCGTACTCCTAGTCATGAGGGAGGAGTTTTCAAGTCTCACGATGATTGTGTAGAGCCAGAGAGCTACTTGGATGATCATGGAAACGCTCAAATGCATCAGAAATCTGAGACAACTAGCAAGGAGGAATTCCATCTATGGAACTTGAAAGGGGAATCCAATCCACTTTTAGATGGTAACCAAGAGAATGGTATATTTACAGCCGAAGATGATCACCCCTTTAACTCCAAAGAAATGCATTCCACTTCTTCCCTTCTTCCTTCTGTATGA 951 0.4132 MGTRTPLFRDFKKQASFFLKEKFKTARLALTDVTPAELMTEEVTKGNPWAPDSPTLRSISRAAFELDDYWRIVEILHKRLLKFEKKNWRASYNSLIVVEHLLTHGPESVAEEFQSDKDVISQMKDFHFTDASGFNWGVTVRKKSERILKLMEEGTLLKEERNRARNLSRGIQGFGSFSQRSTHAQGVLHEKSLPATFDRSNSDFNNNHSQENQSFGSNHFLQTAAVKSRTPSHEGGVFKSHDDCVEPESYLDDHGNAQMHQKSETTSKEEFHLWNLKGESNPLLDGNQENGIFTAEDDHPFNSKEMHSTSSLLPSV* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0238 316 MobiDBLite consensus disorder prediction 286 316 - -
Vra4g0238 316 SUPERFAMILY ENTH/VHS domain 14 161 IPR008942 -
Vra4g0238 316 Pfam ENTH domain 34 155 IPR013809 -
Vra4g0238 316 ProSiteProfiles ENTH domain profile. 28 161 IPR013809 -
Vra4g0238 316 CDD ENTH 36 152 - -
Vra4g0238 316 PANTHER EPSIN-2-LIKE 6 313 - -
Vra4g0238 316 PANTHER EPSIN/ENT-RELATED 6 313 - -
Vra4g0238 316 SMART enth_2 34 161 IPR013809 -
Vra4g0238 316 Gene3D - 30 177 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0238 Vra-Chr4 5065500 5068019 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0238 K12471 - gmx:100812797 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0238 4 5065500 5068019 Vra4g0238 4 5065500 5068019 ECH
Vra4g0238 4 5065500 5068019 Vra2g0605 2 4766907 4768796 PCT