Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0605 ATGAGCACGCCCTTCTTCCATGAATTCAAAAAGCAAGCTTCTTTCTTCCTCAAGGAGAAAATCAAAACTGCTAGATTAGCTCTGACGGATGTCACCCCTGCAGAACTGATGACAGAAGAGGCAACTAGTGGAAATCCATGGGCTCCAGATTCCAGAACTCTCAGATCAATTTCAAGGGCTGCTTTTGAATTAGATGATTATTGGAGGATTGTGGAGATTCTGCATAGAAGGTTCCTGAAACTCGAAAAGAAGAATTGGAGGGTCTCTTACAATTCCCTGATCGTGCTTGAGCACCTGTTGACTCAAGGACCAGAGAGTGTTGCTGAGGAATTTAAGAGTGACAAAAATGTCATCGGCCAGATGAAAAGTTTTCAGTATATTGATGACACTGGGTTTAATTGGGGCCTAACTGTCAGAAAGAAATCAGAGAGAATAGTGAATCTGCTGGAAGAAGTAACTCTTCTAAAGGAAGAGAGAAAACAAGCTAGAAGGTTATCTAGAGGAATTGAAGGTTTTGGAAGTTTTCCCCATCGGTCAACTCCAGCACAAAGTATTCTTCGTGAGAAATCAATGCCGACCACACTCAAGAGATATGACTCAGACTTGAACAACCATGAAGATCAGGAAAACAAGTCCTCTTGTTCAAACAATGGTGTGGATGTGGGCACAGTAGCTGTGAAATCTTCTGGCCATCAAGGTGGAACTTTCAAGTCCTTGGATGGTGTGGAAGACAAGGGATACCAGGATGATCTAGGCAACAGTCAAATGCTTCAGAAATCTGAAATAGATGCTAAAGAAAACAAGGAACCTAGCAAGGAAGAGTTCCATCTATGGAACATGAAAGGTGAGTCCAAACCCCTTTTGGATTGTGGTGAAGAGGATTCCAGGATTGGAATCATCAGAACAGAAGATGATCACCCCTTTAATTCAACTGAATTGCATGGCACTGCCTCACTGCTTTCTGCCAGAGATGGAATACTACAAGGGTGTTGA 993 0.426 MSTPFFHEFKKQASFFLKEKIKTARLALTDVTPAELMTEEATSGNPWAPDSRTLRSISRAAFELDDYWRIVEILHRRFLKLEKKNWRVSYNSLIVLEHLLTQGPESVAEEFKSDKNVIGQMKSFQYIDDTGFNWGLTVRKKSERIVNLLEEVTLLKEERKQARRLSRGIEGFGSFPHRSTPAQSILREKSMPTTLKRYDSDLNNHEDQENKSSCSNNGVDVGTVAVKSSGHQGGTFKSLDGVEDKGYQDDLGNSQMLQKSEIDAKENKEPSKEEFHLWNMKGESKPLLDCGEEDSRIGIIRTEDDHPFNSTELHGTASLLSARDGILQGC* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0605 330 PANTHER EPSIN/ENT-RELATED 4 322 - -
Vra2g0605 330 Gene3D - 28 175 IPR008942 -
Vra2g0605 330 CDD ENTH 34 150 - -
Vra2g0605 330 ProSiteProfiles ENTH domain profile. 26 159 IPR013809 -
Vra2g0605 330 SMART enth_2 32 159 IPR013809 -
Vra2g0605 330 Coils Coil 138 165 - -
Vra2g0605 330 MobiDBLite consensus disorder prediction 199 218 - -
Vra2g0605 330 SUPERFAMILY ENTH/VHS domain 12 159 IPR008942 -
Vra2g0605 330 Pfam ENTH domain 32 153 IPR013809 -
Vra2g0605 330 PANTHER EPSIN-2-LIKE 4 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0605 Vra-Chr2 4766907 4768796 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0605 K12471 - gmx:100811093 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0605 2 4766907 4768796 Vra2g0605 2 4766907 4768796 ECH
Vra4g0238 4 5065500 5068019 Vra2g0605 2 4766907 4768796 PCT