Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0227 ATGGGTAGCCCTGAGAAGAATGAAAACAAGGGCTTTTTCGCCGCCATGACTTCCGGCTTCTCCATCTTCAGCAATGCTATGCACCGATCTGTAAACGGGTTGCTGGGGTATGAAGGGGTAGAAGTCATAAATCCGGAGGGTGGTAAAGAGGACGCAGAGGAGGAAGCCCAGAGAGGAAGATGGAAACCTGAGGAAAGAGACGGTTACTGGAAGATGATGCACAAATATATTGGCTCAGATGTAACATCAATGGTAACGCTACCTGTTATTATTTTTGAACCAATGACTATGCTTCAGAAAATGGCAGAGTTGATGGAGTACTCCTACTTGTTAGATCAGGCAGATAAATGTGAGGACCCATACATGAGGATGGTATATGCATCGTCATGGGCTATATCTGTGTACTTTGCATACCAACGGACCTGGAAGCCTTTTAACCCTATCCTTGGAGAGACTTACGAGATGGCTAACCATGGTCGAGTTTCATTTCTTGCAGAACAGGTGAGTCACCATCCCCCGATGAGTGCTGGTCATGCTGAGAATGAGCATTTTACATATGACGTGACTTCAAAGTTAAAGACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCCGTTGGAAGAACACGTGTAACCCTCAAGAAGGATGGTGTAGTTATCGATTTGGTTCCCCCTCCAACCAAGGTTAATAATTTGATATTTGGACGAACATGGATTGATTCACCTGGGGAGATGGTAATGACGAACTTGACAACAGGGGACAAAGTTATACTCTACTTTCAACCATGTGGATGGTTTGGGGCTGGTCGCTATGAAGTAGATGGATATGTGTATAACTCTGCCGAGGAGCCTAAAATATTGATGACTGGAAAGTGGAATGAGTCAATGAGTTATCAACCATGTGATTTGGAAGGAGAGCCTCTTCCAGACACAGAATTGAAAGAGGTTTGGCATGTTGCTGATGTACCAGCAAATGATAAATTCGACTATACATACTTTGCGCATAAATTAAACAGCTTTGACACTGCTCCTAGAAAGTTGTTGCCATCAGACTCCCGTTTACGTCCAGATAGATTTGCACTTGAAATGGGTGATCTATCCAAATCAGGGGCAGAAAAGAGCAGTTTGGAGGAGAGGCAACGCGCTGAAAAGAAAATCCGAGAAGCCAAAGGGCATAAATTTGCACCAAGATGGTTTGATTTGACTGAAGAGGTGACTTCAACTCCATGGGGTGATTTGGAGATCTACCAATACAATGGTAAATACACTGAGCATCGTACTGCTATTGATAACTCAGACAGCATTGATCATCTTGATAATAAAGATATTGAATTTAATCCATGGCAGTATGGTGATTTGTCCAAAGAATGA 1371 0.4289 MGSPEKNENKGFFAAMTSGFSIFSNAMHRSVNGLLGYEGVEVINPEGGKEDAEEEAQRGRWKPEERDGYWKMMHKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDQADKCEDPYMRMVYASSWAISVYFAYQRTWKPFNPILGETYEMANHGRVSFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKKDGVVIDLVPPPTKVNNLIFGRTWIDSPGEMVMTNLTTGDKVILYFQPCGWFGAGRYEVDGYVYNSAEEPKILMTGKWNESMSYQPCDLEGEPLPDTELKEVWHVADVPANDKFDYTYFAHKLNSFDTAPRKLLPSDSRLRPDRFALEMGDLSKSGAEKSSLEERQRAEKKIREAKGHKFAPRWFDLTEEVTSTPWGDLEIYQYNGKYTEHRTAIDNSDSIDHLDNKDIEFNPWQYGDLSKE* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0227 456 ProSitePatterns Oxysterol-binding protein family signature. 166 177 IPR018494 -
Vra4g0227 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 453 - -
Vra4g0227 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 453 IPR000648 GO:0008289
Vra4g0227 456 SUPERFAMILY Oxysterol-binding protein-like 62 438 IPR037239 -
Vra4g0227 456 Gene3D - 359 448 - -
Vra4g0227 456 Pfam Oxysterol-binding protein 69 426 IPR000648 GO:0008289
Vra4g0227 456 Gene3D - 150 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0227 Vra-Chr4 4976170 4981545 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0227 - - gmx:100779808 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0227 4 4976170 4981545 Vra4g0227 4 4976170 4981545 ECH
Vra4g0227 4 4976170 4981545 Vra2g0594 2 4684129 4689850 PCT