Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0226 ATGGTGTTGCAGAAGAGGTCATATTATAGCTTTAATGGACAACAGGTGCCAACCAAGCGCCGAGCTACTAGATCAGCTAGGAGAAACGCTACATTTCAAAGGTTGGAAGAGAAACAAATGTGTGCATTTGACTTATTGGCCACCGTAGCTGACAATTTATTGCAAGGGAAACAGAATCCTACCACATGTAGTGATAGTTCATTGGAAAAAGATAGGGATGGATTTGTAAAAGAGGAGTGCCAAGATTTAAATAAACCATTAAAAACTGAGCTTTCTGATGAAGCAAGTTGTGACAGAAGATGTCAGCATGACTTTGTTAAAGAAGGATGCCCAGATGAAAATAAACCATTAAAAGCTGAGCTTTCAGACGAAGGAAGTAGTGATAGAAAATGTTTCTCTAATATTTCTTCCCAAGTGTACAATCAAAATTGTTGTTTGAAGGAATTCGCAGTTCATGAAATTGAAGGCCATTCATGCATTGCTTCTATAGTAACAAGTTCTAGTTGCTCAGAGAAGTTTGTTGCTGAAACACTGGTGGATGGGAAAGGCCAAAATGGAACTGAAAATTTAGCTAGCAAAATTGAATTGGGTTCTTCTGGAAGTCCAGAGAGTATTGGTTTCAAGTTAGATGGTGATGTAAGTAAAGTAAAAGATGTTCAATTTGGGAAGGCTCCCATGGATACTGGGACTGGGTTGTGCTGTTCTGAGGATCACTTGGATGAAAAACCTCCAGCACTGGTAAGTTCTTGTTGCAATGCCAAGTTGTCTGGGTATGACGACAGCATGCCTCATAGCTCATTGTCCAAAGGTTGTGACAATGTACTAGTAGATAGTAGAGATGATGACGAAAACTTTTCTGGGTGTGCTCACCCTAGTACCAAAATAAAGTCCTCTAGACCAATTACTTGTATAGATGATAGAAAAATAAACAAAAGATTGGCTTCAAAATATCTTAAAGTTGCTCAAGAATCCAAGCCTGATAAGTTATCTAATAGTGTTTTGGATGGAAATTTGAAGCCAGTTTACAGCAATAGGAAGAACTATTACAAAAGCCAAAGATCTGAAATGAACATTCCTTTCAAAAAGAGGAAACTTTTTAAATGCTCTGATACAAATTCTAACGGATATATCAGAAGTGGTGACACTTATTTTTCACTCAAGAACGAAACGAATCAAAGTGTTTCATATTCACCTTCCGGGATGAGCAAAGATCATGGAACATCATCCTTGGGGCACTCTGCATTACGGTCTAGAGATTCTCATGTGAAGCTTAGGATCAAATCATTTAGAGTGCCCGAGCTTTTTATTGAGATTCCAGAAACTGCAACCATTGGGTCCTTAAAGAGGACAGTGATGGAGGCAGTGACTGCAGTACTCGGAGGTGGATTGCGCGTTGGAGTGATTCTCCATGGGAAGAAAGTTAGAGATGACAGTAAAACTCTACTCCAGACTGGAATTTCTCGTGATAACCACCTGGATGCTTTGGGATTCGCCTTAGAGCCTAATTTTTCACAAAATCTACCACCTGCTTGTGCAACTAATTCTCTTCGCGTTCCTACTGCGGATGTGCCTCAACCTTTTATAGGGTATCCTTCAATTCCTGCTGTAATTCATCAAAGGATTCAGGGGTTTTCTAGCATGTTAGCTGAGCATCAAGCAACAGGTTTAGGTAACCTCGTCGAAAGTGATCATGATTCAGCTCCTTCTCCCATCAACACATCAGGTGAAAAAAAAATTTCAGATTCCAAAGAACTTATTCCTGAAATGGGTATGGAGGCACTAGCTGTGCTACCTGGGCATCAAAAGTCAAAGCGAACCGAAATCGCACAGCGCCGTATTCGTAGGCCTTTTTCTGTTGCTGAAGTGGAAGCATTGGTTCAAGCAGTTGAGAAACTTGGAACTGGAAGGTGGCGTGATGTTAAGCTTCGTGCTTTTGATAATGCAAAGCATCGAACATACGTGGATTTGAAGGATAAATGGAAAACACTGGTGCACACTGCAAGAATATCCCCTCAGCAAAGGAGGGGAGAGCCTGTTCCTCAGGAACTTTTGGATAGGGTTCTAATTGCCCACGCATATTGGTCCCAGCAGCAGACTAAGCAACAGCTCAAGCACCATTCAAAACCTTGCCTTCTCCTTTAA 2142 0.409 MVLQKRSYYSFNGQQVPTKRRATRSARRNATFQRLEEKQMCAFDLLATVADNLLQGKQNPTTCSDSSLEKDRDGFVKEECQDLNKPLKTELSDEASCDRRCQHDFVKEGCPDENKPLKAELSDEGSSDRKCFSNISSQVYNQNCCLKEFAVHEIEGHSCIASIVTSSSCSEKFVAETLVDGKGQNGTENLASKIELGSSGSPESIGFKLDGDVSKVKDVQFGKAPMDTGTGLCCSEDHLDEKPPALVSSCCNAKLSGYDDSMPHSSLSKGCDNVLVDSRDDDENFSGCAHPSTKIKSSRPITCIDDRKINKRLASKYLKVAQESKPDKLSNSVLDGNLKPVYSNRKNYYKSQRSEMNIPFKKRKLFKCSDTNSNGYIRSGDTYFSLKNETNQSVSYSPSGMSKDHGTSSLGHSALRSRDSHVKLRIKSFRVPELFIEIPETATIGSLKRTVMEAVTAVLGGGLRVGVILHGKKVRDDSKTLLQTGISRDNHLDALGFALEPNFSQNLPPACATNSLRVPTADVPQPFIGYPSIPAVIHQRIQGFSSMLAEHQATGLGNLVESDHDSAPSPINTSGEKKISDSKELIPEMGMEALAVLPGHQKSKRTEIAQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLIAHAYWSQQQTKQQLKHHSKPCLLL* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0226 713 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 609 668 IPR017930 -
Vra4g0226 713 PANTHER TELOMERE REPEAT-BINDING PROTEIN 2-RELATED 1 713 - -
Vra4g0226 713 SMART sant 613 666 IPR001005 -
Vra4g0226 713 Gene3D - 602 706 - -
Vra4g0226 713 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 713 IPR031105 -
Vra4g0226 713 CDD SANT_TRF 615 665 - -
Vra4g0226 713 ProSiteProfiles Myb-like domain profile. 609 664 IPR001005 -
Vra4g0226 713 MobiDBLite consensus disorder prediction 394 414 - -
Vra4g0226 713 SUPERFAMILY Ubiquitin-like 417 507 IPR029071 -
Vra4g0226 713 SUPERFAMILY Homeodomain-like 615 696 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0226 Vra-Chr4 4968723 4974428 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0226 - - gmx:100780881 1172.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0226 4 4968723 4974428 Vra4g0226 4 4968723 4974428 ECH
Vra4g0226 4 4968723 4974428 Vra2g0593 2 4675623 4681043 PCT