Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0593 ATGGTCTTACAGAAGAGGATAGAGTACGGATTTAATGGCTACCAGGCTCCTGCCATGCCCCGAGCTTCTCGCTCAGTTAGGAGGAGGGCTGTATTTCAAAGAGCGGAAGATAAGCAAAAGTGTTCATTTGACTTATTGGCCACCGTAGCTGGTAAACTATTACAAGAGAGAGAGAATGCAGCCATTTCTAGTGATACATTATCAAATAAGGATCAGTGTAGATTTGTCAAAGATTGCCATGATGCAAATAAACCATCCAAATCCGAGCTTTCTGAGGACGGAAATTGTGACAAAAAAAGTTTGAATGAATTCCCACGTCCTTCAATTGAAGACCATGCTAAGATTGCTTCTATAGTAACAAGTTCTAGTTGCTTAGAGAGGTTCGTTGCAAAAAAATTGGTGGATGGAAATAGCCATATCAAAATGGAAAATGTTACTAGCGAAGTCAAATTAGACTCTTCGGGTTATCCAAAGGAAAGTCAGTTCAAGTTAGATGGCAATACGGGTAAAGGAAAGGATGCGATGCATGAGTTGGAGAAGATACCCATTGGCAGTGGAATTGAGATGTACAGTTTTCGGGATCCGCCGGATGAAAATCCTCCTGCGTTGATCAGTTTAGGTGGCAGTGCCAAGTTGTCTGGGTATAATGATAGGATTCCCCGTAGCTTGTTGTCCAAAGGTTGTGACAATGTACCAGTAGTTAGTAGAGATGATGACGAAAACTCTTCTGGGTGTACTCACCCTATTAATACTAAAACCAAGGCTTTTAGGCCAAAGAATTGTATAGATGATAGTGGAATAAGTAAAAGACTGGCTTCTAACTTTCAGAAAGTTGCTCAAAAGCCGAAGCATGACACACTTTCTAACCGTGATGGAATTTGGAAGAAAACTTACCACAATCAGAGGAAGTGCAATAAAAGCCAAATTTCTCAGATGAATATTCCTTTCAAAAAGAGGAAGCTTTTTAATTATAAGTCTGTCTCAAATTCTAGTGGATTTACCAGAAGTGGTGGAATTTATTATTCACCGAAGAATTGTAGTAATCCGGATGCTTGTGACTCACTTCCTGGGATGCACAGAGACCCTGGAATTCCATCCTTGGAAGCATGTCAACACCAGATGTTATGTCGAATAGGTTCTCATGTGAAGCTTAGGATCAAGTCATTTAGAGTGCCAGAGCTTTTTATAGAGGTTCCAGAAACTGCAACAATTGGGTCCTTGAAGAGGACAGTAATGGATGCAGTGACTGCTGTACTCGGAGGTGAATTGCATATTGGTGTTTTTCTCCAGGGAAAGAAAGTTAGGGATGATAGTAAAACACTACTTCAAACTGGAATTTCTCATCATAACCAGTTTGATGCTTTGGGTTTTACCCTGGAGCCTAATTCTTCACAAAGCCTACCGATTGTATGTGCTGCACATTCTCCCTGTCCCGGTGCTGACGTAACTCCGCCTGTATTAAGGTGTCCTTCTAGTCCAGCTGTAATTCATCAGAGCATTCAAGGCAATTCTGACACGTTACCTGAGCATCAAGTAACAAGTTTTGGTAGCCAATTTGAAAGTGATAATGATTCGGCACCTTATCCTGCTAACACTTCTGTTGACAAAGGTATGGAAGATTCCAAAGAATTGGTTACTGTTCTTGAAAAGGGTAGGGAGGAACTAGCTATGGTATCTGTACCCCAGAAGCCAAGGCGATCAGAAATGGTACAGCGCCGAATCCGTAGGCCTTTCTCTGTAGATGAAGTAGAAGCACTGGTTCAAGCAGTTGAAAAACTAGGAACCGGAAGGTGGCGTGATGTTAAGCTTTGTGCTTTCGATAATGCTAAGCATCGGACATATGTGGATTTGAAGGATAAATGGAAAACACTAGTGCACACGGCAAGAATATCCCCTCAGCAAAGAAGGGGTGAACCTGTTCCCCAAGAACTTTTGGACAGGGTTCTAGTGGCCCACGCATATTGGTCCCATCAGCAGAATAAGCAGCAGCAGAAGCAGCAGCAGCAAACTGAAACCGTCTTCTCCTTCAATCGTAAGGGGCAAGGGTTGTCATCAGCCAGTGGCCATGTGGATGACAGTGTTTTGGTTTCTGACTTTTGTTGTTAG 2106 0.424 MVLQKRIEYGFNGYQAPAMPRASRSVRRRAVFQRAEDKQKCSFDLLATVAGKLLQERENAAISSDTLSNKDQCRFVKDCHDANKPSKSELSEDGNCDKKSLNEFPRPSIEDHAKIASIVTSSSCLERFVAKKLVDGNSHIKMENVTSEVKLDSSGYPKESQFKLDGNTGKGKDAMHELEKIPIGSGIEMYSFRDPPDENPPALISLGGSAKLSGYNDRIPRSLLSKGCDNVPVVSRDDDENSSGCTHPINTKTKAFRPKNCIDDSGISKRLASNFQKVAQKPKHDTLSNRDGIWKKTYHNQRKCNKSQISQMNIPFKKRKLFNYKSVSNSSGFTRSGGIYYSPKNCSNPDACDSLPGMHRDPGIPSLEACQHQMLCRIGSHVKLRIKSFRVPELFIEVPETATIGSLKRTVMDAVTAVLGGELHIGVFLQGKKVRDDSKTLLQTGISHHNQFDALGFTLEPNSSQSLPIVCAAHSPCPGADVTPPVLRCPSSPAVIHQSIQGNSDTLPEHQVTSFGSQFESDNDSAPYPANTSVDKGMEDSKELVTVLEKGREELAMVSVPQKPRRSEMVQRRIRRPFSVDEVEALVQAVEKLGTGRWRDVKLCAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLVAHAYWSHQQNKQQQKQQQQTETVFSFNRKGQGLSSASGHVDDSVLVSDFCC* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0593 701 SMART sant 574 627 IPR001005 -
Vra2g0593 701 MobiDBLite consensus disorder prediction 151 171 - -
Vra2g0593 701 PANTHER TELOMERE REPEAT-BINDING PROTEIN 2-RELATED 1 670 - -
Vra2g0593 701 SUPERFAMILY Homeodomain-like 576 656 IPR009057 -
Vra2g0593 701 MobiDBLite consensus disorder prediction 515 539 - -
Vra2g0593 701 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 670 IPR031105 -
Vra2g0593 701 CDD SANT_TRF 576 626 - -
Vra2g0593 701 Gene3D - 564 668 - -
Vra2g0593 701 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 571 629 IPR017930 -
Vra2g0593 701 SUPERFAMILY Ubiquitin-like 380 463 IPR029071 -
Vra2g0593 701 ProSiteProfiles Myb-like domain profile. 570 625 IPR001005 -
Vra2g0593 701 MobiDBLite consensus disorder prediction 515 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0593 Vra-Chr2 4675623 4681043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0593 - - gmx:100797436 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0226 4 4968723 4974428 Vra2g0593 2 4675623 4681043 PCT