Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0184 ATGGGTGCGGCTAGGTTTATGACCGGGATGCTGCTGTTATTCATGGCACTCAGCTCCGGCGTGCGCTCGTGTCCGCCATCCGACAGGGCTGCGCTGCTTGCCTTCAGGGCGGCGCTCCACGAACCCTACCTCGGAATCTTCAACTCGTGGACTGGCGCCGACTGCTGCCACAACTGGTACGGCGTGAGCTGTGACCAGGAAACCCACCGCGTCGCCGACATCACCCTCCGCGGCGAGTCGGAGGAGCCGATCTTCGAGCGAGCTCACCGGACTGGCTACATGACCGGCTACATCTCGCCGGCGATCTGCAAGCTCCCGCGTCTCTCCAGCATCATCATCGCAGACTGGAAGGGAATCTCCGGCGAGATCCCCCGCTGCATCACAACCCTACCGTTCCTCCGCATCGTCGACTTCATCGGAAACCGCATCTCCGGCAGCATCCCCGCAGACATCGGCAGGCTCCAGCGCCTCACGGTGCTTAACTTCGCCGACAACCAAATCTCCGGCACGATCCCCGCGTCGCTCGCGAACCTCACGAGTCTCATGCACTTGGATCTCCGTAACAACCTCCTCTCCGGGCCCATTCCCAGGAACTTCGGTTCTCTTCGAATGCTGAGCAGGGCCTTGCTGAGTGGAAACCGCCTTAGTGGGCCCATCCCGGGCTCGGTTTCACTCATTTACCGTCTGGCAGATCTGGATCTGTCTCGGAACCAACTTTCTGGGCTGATTCCGCAGTCTCTGGGTAAAATGGCGGTGCTATCGACTCTGAATTTGGACTTCAATAAACTTTCTGGGCCCATTCCCGTGAGCCTGTTTAGTTCCGGGATCAGTGACCTAAACTTGAGCCGAAACGCTTTGCAAGGTAACATACCCAACGCGTTTGGGCCAAGGTCTTATTTCACTGCTCTTGATCTGTCCTACAATAATCTGAAAGGGGCCATACCCAAATCCATTTCCTCTGCTTCCTACATTGGACACTTGGATTTGAGTCATAACCATCTCTGTGGCAAGATTCCCCTTGGATCTCCCTTCGATCATCTCGAAGCGTCGTCGTTTGTCTACAACGATTGTCTCTGCGGGAAGCCACTCAAACCTTGCTAA 1101 0.5668 MGAARFMTGMLLLFMALSSGVRSCPPSDRAALLAFRAALHEPYLGIFNSWTGADCCHNWYGVSCDQETHRVADITLRGESEEPIFERAHRTGYMTGYISPAICKLPRLSSIIIADWKGISGEIPRCITTLPFLRIVDFIGNRISGSIPADIGRLQRLTVLNFADNQISGTIPASLANLTSLMHLDLRNNLLSGPIPRNFGSLRMLSRALLSGNRLSGPIPGSVSLIYRLADLDLSRNQLSGLIPQSLGKMAVLSTLNLDFNKLSGPIPVSLFSSGISDLNLSRNALQGNIPNAFGPRSYFTALDLSYNNLKGAIPKSISSASYIGHLDLSHNHLCGKIPLGSPFDHLEASSFVYNDCLCGKPLKPC* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0184 366 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Vra4g0184 366 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 8 366 - -
Vra4g0184 366 Gene3D Ribonuclease Inhibitor 91 366 IPR032675 -
Vra4g0184 366 SUPERFAMILY L domain-like 23 365 - -
Vra4g0184 366 Pfam Leucine Rich Repeat 232 249 IPR001611 GO:0005515
Vra4g0184 366 Pfam Leucine rich repeat 156 215 IPR001611 GO:0005515
Vra4g0184 366 Gene3D Ribonuclease Inhibitor 22 90 IPR032675 -
Vra4g0184 366 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 8 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0184 Vra-Chr4 4624422 4625887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0184 89 366 Receptor kinase-like Gene Family AT5G46330 38.732 1.69e-47 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0184 - - gmx:100804739 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0184 4 4624422 4625887 Vra4g0184 4 4624422 4625887 ECH
Vra4g0184 4 4624422 4625887 Vra2g0526 2 4128858 4130149 ECH
Vra4g0184 4 4624422 4625887 Vra2g0526 2 4128858 4130149 PCT