Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0756 ATGGATGCTCTGTGTTTACACAGTAGCATCTGTAAGATAGCTACGATTACTGCAACTGCACGCGCAAATGATGATTACGCTTCGCAGTCTCAGGTGAGCGCGGTGGGACGCTCCTCCTTGTTTTCCAGATTCTCTTTTAGATACCCTTTGACGTCTTTATGGCCACAACAACTCACGGGGAATGCTGCCGGCTACAATGGTCTCGCCGTCGACGACGCCGTTTTGGCGGATAATGAAACTGAAGAAGGAGAGGGACAAAACGGGAATTGGGTTTTCAAGATGTTTCATGCAAGGTCTGTTCGGAGCGGGGAACAGAGGAACGATGAAGACAAGGTTGTTGTAAATGTTCTAACGGATCAAGAAATGGAGGAGGAAGAGTGTTATGGCTGTAGGGTTGATTATGACGACGACAACAACGAAGACAAAGAAGTAGAAAATGAAGAGGTTTTGTTCGATAGAGACTCATTTTCGAGAATGCTTCGGAGGGTGTCATTGCCCGAAGCTAAATTATATGCACGCATATCCCACTTGGGCAATTTGGCATACTCTATCCCAAATATCAAACCAGGGATCCTCTTCAAAAACCATGGTCTGCGTTTTGTCACTTCATCCATAGAGAAAAAGAAATTGGCTGTGGCTGCAGAAAAAAACCAGACATCGACTGCAGTTCAGAAAGAGGAAACTAACGACGAGGATGATGTGGGAGAAACAAAAGACAAAAAGAACGGTGGATACGTCATAGGTGCGTGTACTGCATACGAGACTGCTGTTTCTGCAGCCTCTTATCTCCATGCTCAAACAAAGAGCATACTTTCATTCCCATCTTCCAACGCCGAGGAAGGTGAAGGTTCACATGAAGCAAGCAAAGAAAGCTTTAAAGGAAACAAGATGACAAAAACGGAGGAAGCAGCTCTGAAAGCAACTACTGATTCGGTAACAGCAGTTGTTGCTGCAAATGAGGATGTAAAACAGGCTTTTGCAGATGATTTGAGCTCGACAAGCTCTTCACCCTGTGAATGGTTCGTATGCGACGATGACGAGACTGCTACAAGATATTTTGTGATCCAGGGTTCCGAGTCATTTGCTTCCTGGAAAGCGAACCTACTATTTGAGCCAGTTAAATTCGAGGGTTTGGATGTCTATGTGCATAGAGGTATATATGAGGCTGCAAAAGGGACATATCAACAGATGTTACCAGAAATTCGTGCTCACCTAAAATCTCACGATTCCCGTGCAACTTTCCGTTTCACTGGACATTCTCTTGGGGGAAGCTTGGCATTACTCGTAAACCTTATGCTGTTAATAAGAAAGGAAGCACCATTGTCCTCTCTGCTTCCTGTCATAACGTTTGGCGCCCCATCCATCATGTGTGGAGGTGATAGTCTTCTTGACAAGCTAGGATTGCCACGGAGTCATGTTCAAGCAATCACAATGCACAGAGACATAGTACCACGAGCATTTTCTTGCAAGTACCCTAACCATATTGCAGAACTGCTAAAGGCTCTCAATGGCAACTTCCGCAATCATCCGTGCCTTAATAACCAGAAGCTATTGTATGCACCAATGGGTGAGCTCTTGATCCTACAGCCAGACGAGAAATTTTCGCCAAGTCATGATCTTTTGCCCTCAGGCAGTGGCCTATATCTTTTGAGTGGTCACTTGTCAGAATCTAGTGACGCAGTAAAACAGATCCGGGCAGCAAAGATGGTGTTCTTGAATTCACCACACCCACTTGAGATATTAAGTGACCGATCTGCGTATGGATCTGGAGGAACCATTCAGAGAGATCACGACATGAATTCGTACTTGAGATGTGTGAGAACCGTGGTTCGCCAAGAACTTCACCAGATTCGCAAGGCAAGGAGAGAGCAAAGGCGGCGAAAGGTGTGGTGGCCACTGGTGGTCCCACGTGGGAGTGAGAGTGCGGCAGTTGGAGGGTCCATGATATCGGTGAATATGATTAACGACCAACCTTCTCTCTTTGGCATGATTGAGAGTGGGAGAGAATCATTGAAAAGGTTGGGTAGTCTGGTTGCATCCCAACAGATACAATTGTTTGTGGTGCTCCTGTTTCCTGCAAGGTTGTTACTGGTGGGAGCATGTAGCTTAATTAGCTTAAGATGA 2124 0.4572 MDALCLHSSICKIATITATARANDDYASQSQVSAVGRSSLFSRFSFRYPLTSLWPQQLTGNAAGYNGLAVDDAVLADNETEEGEGQNGNWVFKMFHARSVRSGEQRNDEDKVVVNVLTDQEMEEEECYGCRVDYDDDNNEDKEVENEEVLFDRDSFSRMLRRVSLPEAKLYARISHLGNLAYSIPNIKPGILFKNHGLRFVTSSIEKKKLAVAAEKNQTSTAVQKEETNDEDDVGETKDKKNGGYVIGACTAYETAVSAASYLHAQTKSILSFPSSNAEEGEGSHEASKESFKGNKMTKTEEAALKATTDSVTAVVAANEDVKQAFADDLSSTSSSPCEWFVCDDDETATRYFVIQGSESFASWKANLLFEPVKFEGLDVYVHRGIYEAAKGTYQQMLPEIRAHLKSHDSRATFRFTGHSLGGSLALLVNLMLLIRKEAPLSSLLPVITFGAPSIMCGGDSLLDKLGLPRSHVQAITMHRDIVPRAFSCKYPNHIAELLKALNGNFRNHPCLNNQKLLYAPMGELLILQPDEKFSPSHDLLPSGSGLYLLSGHLSESSDAVKQIRAAKMVFLNSPHPLEILSDRSAYGSGGTIQRDHDMNSYLRCVRTVVRQELHQIRKARREQRRRKVWWPLVVPRGSESAAVGGSMISVNMINDQPSLFGMIESGRESLKRLGSLVASQQIQLFVVLLFPARLLLVGACSLISLR* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0756 707 MobiDBLite consensus disorder prediction 282 296 - -
Vra3g0756 707 MobiDBLite consensus disorder prediction 215 237 - -
Vra3g0756 707 MobiDBLite consensus disorder prediction 274 296 - -
Vra3g0756 707 Gene3D alpha/beta hydrolase 289 516 IPR029058 -
Vra3g0756 707 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 20 703 IPR043367 GO:0008970
Vra3g0756 707 CDD Lipase_3 307 485 - -
Vra3g0756 707 SUPERFAMILY alpha/beta-Hydrolases 335 520 IPR029058 -
Vra3g0756 707 Pfam Lipase (class 3) 353 489 IPR002921 GO:0006629
Vra3g0756 707 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 20 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0756 Vra-Chr3 7806929 7810471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0756 1 707 Acyl Lipid Metabolism Gene Families AT1G02660 52.917 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0756 - - gmx:100788786 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0756 3 7806929 7810471 Vra3g0756 3 7806929 7810471 ECH
Vra3g0756 3 7806929 7810471 Vra8g1279 8 28695551 28699145 PCT