Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0690 ATGGCTACGCTTTCTGCAAGCGCTTCTCCTCCATGGCCAAATCCTGATCAAACCACCTCTCCCAGTTCAAATCCAAACCCTAATTTCCTTCCCGACCAGTCCCAAACACTCGACTTCGAATCCCTCATGCCTCAGCAACCGAAATCGCCAGAGCGCTACCGCTCCCCCGCCGCATCGCCGCCGGGATTCTCCTCGGCGGAGCCCCCGACGGTGCTCCACGTCGCCTTCAACCAGGACCATGCTTGCTTCTCCGCCGCCACTGACAACGGTTTCCGCATCTATAATTGCAACCCCTTCAGCGAGCAATTCCGCCGCGAGTTTGACGGCGGAGGGATCGGTCACGTCGCGATGCTCTTCCGCTGCAACATCATCGCCCTTGTCGGCGGCGGACCCAATCCCCATTACCCGCCCAACAAGGTCATGATCTGGGACGACCATCAGGGCTGCTGCATCGGTGATTTATCCCCCCGTGCCGGGGTTCGCAGCGTCCTGCTCCGCCGCGACCGGATTATCGTCGCTGCCGAGCAGAGGATTTTGGTCTACAACTTCCTGGACCTCAATCTCTTGCACCAGATTGAGACCTATCCCAACCCTAAGGGTCTCTGCGCGGTTTCGCAACTGTCTGATTCGTTCGTTCTCGCATGCCCTGGGTTGCAGAAGGGTCAGATTCGCGTGGAGCACTATTCGCAAAAGAAGACAAAGTTCATATCAGCGCATGACTCCAGAATTACTTGTTTCGCTCTCACTCTTGATGGGCAGTTAATTGCCACCGCCAGCTCCAAGGGCACGCTGATTCGAATTTTCGACACGGTTCAGGGCACACTTCTTCAGGAAGTGAGAAGGGGTGCAAATGTTGCTGAGATCTATAGTTTGGCATTCTCTTCTACTGCACGGTGGCTAGCAGTCTCAAGTGACAAGGGTACTGTCCATGTATTCAGCCTTAAGGTTAATTCTAGCATCTCCGAGGAAGAAAAGCCTCAAAATCCATCCAATTCAGATACTGCCATTACCCCTTCTAACTCATCTCGCTCCTTCATCAAATTTAAAGGAGTGTTACCCAAGTATTTCAATTCTGAGTGGTCGGTTGCTCAGTTTCGCTTACAAGAGGGCTCTCACTACATAGTTGCATTTGGTCACGAAAAGAATACAATCATAATTCTTGGCTTGGATGGAAGCTTCTATAAATGTCAATTTGATCCAGTACATGGAGGGGAGATGGCTCAGCTGGAATATCATAACTTTTTAAAGCCAGCAACAGAAACAACCATGTGA 1272 0.5173 MATLSASASPPWPNPDQTTSPSSNPNPNFLPDQSQTLDFESLMPQQPKSPERYRSPAASPPGFSSAEPPTVLHVAFNQDHACFSAATDNGFRIYNCNPFSEQFRREFDGGGIGHVAMLFRCNIIALVGGGPNPHYPPNKVMIWDDHQGCCIGDLSPRAGVRSVLLRRDRIIVAAEQRILVYNFLDLNLLHQIETYPNPKGLCAVSQLSDSFVLACPGLQKGQIRVEHYSQKKTKFISAHDSRITCFALTLDGQLIATASSKGTLIRIFDTVQGTLLQEVRRGANVAEIYSLAFSSTARWLAVSSDKGTVHVFSLKVNSSISEEEKPQNPSNSDTAITPSNSSRSFIKFKGVLPKYFNSEWSVAQFRLQEGSHYIVAFGHEKNTIIILGLDGSFYKCQFDPVHGGEMAQLEYHNFLKPATETTM* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0690 423 Gene3D - 54 394 IPR015943 GO:0005515
Vra3g0690 423 SMART WD40_4 272 313 IPR001680 GO:0005515
Vra3g0690 423 SMART WD40_4 147 182 IPR001680 GO:0005515
Vra3g0690 423 SMART WD40_4 53 95 IPR001680 GO:0005515
Vra3g0690 423 SMART WD40_4 229 269 IPR001680 GO:0005515
Vra3g0690 423 Pfam WD domain, G-beta repeat 286 312 IPR001680 GO:0005515
Vra3g0690 423 Pfam WD domain, G-beta repeat 233 268 IPR001680 GO:0005515
Vra3g0690 423 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 25 419 - -
Vra3g0690 423 SUPERFAMILY WD40 repeat-like 68 328 IPR036322 GO:0005515
Vra3g0690 423 MobiDBLite consensus disorder prediction 21 43 - -
Vra3g0690 423 MobiDBLite consensus disorder prediction 1 66 - -
Vra3g0690 423 PANTHER WD REPEAT PHOSPHOINOSITIDE-INTERACTING-LIKE PROTEIN 25 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0690 Vra-Chr3 7354772 7358425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0690 K22991 - gmx:100781692 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0690 3 7354772 7358425 Vra8g1496 8 31890138 31893057 ECH
Vra3g0690 3 7354772 7358425 Vra3g0690 3 7354772 7358425 ECH