Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0665 ATGGGTGAAACGATGAAGAAGGAACCGTCACAGTGGTGGTGGCTTGATAGTCAGAACACTACTAATCGATCCCCATGGCTTCAATCCACACTCTCTGAGCTAAATGTGAAGACAAGGGCAATGCTAAAGTTAATTGAAGAAGATGCAGATTCCTTTGCCAAACGTGCAGAGATGTATTACAAGAAGCGACCAGAACTTGTGAGCATGGTTGAGGATTTCTACAGGACACACCGCTCCCTAGCAGAGCGCTATGATCAAGTCAAACCTGATACCACTGGAATTGGACACCTCGTTACTGGGGGATCACCTTTTGCTTCAGCCAAGTACCAGATAGAGAAGTTGATGTGTTTTTCAGATAATGGGTACGACACCTATTCTGAGCATTGTGATGTGTACGAGTCTGAGGAATCTGAAGTAGATGATCCTGAGCAGGAGGAAGAGGGGACCGAGTTTGTTCACAGCTGCACAAAAAAGGACAAAGCTTCATCAGTGGCCGTGAGTTATGAATTGCTGAAGCTGAGGGACGAAGTCAGAAGACTCAATGAAGAGGACAATGCTCATAGGGATCAAATCAAGGAGAAGAACACCATTTGTGAGGAAGTCAAGATGTTGAGGGAAGAAATAGGAAGGCTTAGAGATGAGAATGAGGAACAGAAGAAACAACTCAAACAGAAGGATGAAGAGAAGATAGATGTGATAAGACAGCTGAGTTTAGCAATAGATTTGCTGAAGCAGGAGAATGTGAAGATGAGAAATTTCCTTACCAAGGACTCTACCCAGAAATGGAAGAAACCGTTTGATGAGATCAACAAACTTGTGGGAGCCTTTTCGATGAAGTTGTTCAGTGGTGCTCCGAGGAATCAGCCCAGCGTTGAGCTCTCATCATGTGGTCGCAAATAA 900 0.4444 MGETMKKEPSQWWWLDSQNTTNRSPWLQSTLSELNVKTRAMLKLIEEDADSFAKRAEMYYKKRPELVSMVEDFYRTHRSLAERYDQVKPDTTGIGHLVTGGSPFASAKYQIEKLMCFSDNGYDTYSEHCDVYESEESEVDDPEQEEEGTEFVHSCTKKDKASSVAVSYELLKLRDEVRRLNEEDNAHRDQIKEKNTICEEVKMLREEIGRLRDENEEQKKQLKQKDEEKIDVIRQLSLAIDLLKQENVKMRNFLTKDSTQKWKKPFDEINKLVGAFSMKLFSGAPRNQPSVELSSCGRK* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0665 299 PANTHER PROTEIN NETWORKED 4A 10 291 - -
Vra3g0665 299 Coils Coil 194 235 - -
Vra3g0665 299 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 91 IPR011684 GO:0003779
Vra3g0665 299 Coils Coil 170 190 - -
Vra3g0665 299 Pfam KIP1-like protein 12 85 IPR011684 GO:0003779
Vra3g0665 299 PANTHER PROTEIN NETWORKED 3A-RELATED 10 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0665 Vra-Chr3 7166225 7169092 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0665 - - var:108327920 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0665 3 7166225 7169092 Vra3g0665 3 7166225 7169092 ECH
Vra3g0665 3 7166225 7169092 Vra8g1197 8 27194382 27198277 PCT